Gene Gbem_2344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2344 
Symbol 
ID6782343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2719670 
End bp2720164 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content61% 
IMG OID642768343 
Producthypothetical protein 
Protein accessionYP_002139152 
Protein GI197118725 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4970] Tfp pilus assembly protein FimT 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACGCA GAATATCCGC AGACAAGGGG TTCACCCTCT TGGAACTCCT GATCGTGCTG 
GCGATGCTGA CAGTGCTCCT GAGCCTGGCG ACGCTCCAGT TCAACCGCTA CTCCAGGAAA
AGTTCCATTG AGGCGCAGGT GAAGACCCTG CACGCCGATC TTCTAGCGGC GCGCAGCCAG
GCTCTTTTCG AGAAGCGGGC CCGGGCTGTG TCGCTCACCC CCACCGGCTT CGCGGCGTAC
TCTTCGGGGA GCGCCACCGG CAACCCGCTC CAGAGAAAGA CACTACGGCA CAGGCTCTCG
CTCAAGTCGG ATCCTTTCGT GGTCGTGTTC AATGCGGCCG GCGTCAGCGA CAGCGCGGAC
AGCGACGCCG TTTGCACCGA ACCAGCCGGC AACGAGGCTG CGGCCGACAC CTTGGTCATC
ACGCCAACGC GCATAGAAAC GGGGAAAAGG AATGCTTCAG CAGCATGCAG TTCGGAAAAC
ATCACCATCC GGTAG
 
Protein sequence
MKRRISADKG FTLLELLIVL AMLTVLLSLA TLQFNRYSRK SSIEAQVKTL HADLLAARSQ 
ALFEKRARAV SLTPTGFAAY SSGSATGNPL QRKTLRHRLS LKSDPFVVVF NAAGVSDSAD
SDAVCTEPAG NEAAADTLVI TPTRIETGKR NASAACSSEN ITIR