| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2292 |
|---|
| Symbol | |
|---|
| ID | 6782288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2662430 |
|---|
| End bp | 2663470 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642768288 |
|---|
| Product | phosphoesterase RecJ domain protein |
|---|
| Protein accession | YP_002139100 |
|---|
| Protein GI | 197118673 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0618] Exopolyphosphatase-related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCA GTACGAAGCC GCCCGACCTT TTGGCCTATA CCGACTCTCT GCTGACCTGG
GTCAGCGGCC GGGGGCGCAT CCTGATAGTG GTGCACGACA ACCCCGACCC CGATTCGCTC
GCCTCAGCCA TGGCGTTGCG GCACTTTTTT GCGGTGAAGC TGAACCGCGA GGCGGTGATC
GCCTTCTCCG GCATGATCGG CAGAAGCGAA AACCTCGCCA TGGCGAAACT GCTCCAGATT
CCGCTCACCC CGCTGCCCCT CATCGACCTC AAATGTTTCC AGGTTGTCTG CCTGCTGGAC
ACGCAACCCG GCACCGGGAA CAACTCCCTC CCCGCAGGGA TGCGCACCGA CATCGTCATC
GACCACCATC CCATGCGTGA ATCCAGTGCC GCCTGCCGGT GGGTCGATAT CCGCCCCGAT
TACGGGACCA CGGCGACCAT TCTTTTCGAG TACCTGAAGG TGCAGGGGGT GTCGATCGGG
ACCAAGATGG CCACAGCGCT CTTCTACGCC ATCAAATCCG AGACGCAGGA CCTGGGGCGT
GAGGCGAGAA GGGCGGACCG GGACGCCTAC CTGGATCTTT TCCCGCTGGC CAACAAGACC
CTTTTAAACA GCATCACCCG CCCAAGCCTT CCCCGCGAAT ACTTCATCTC GCTGCATAAC
GCGCTGGAGC ACGCGGCGCT CTACGGCAAG GTGCTGGTGG CGTCGCTCAA GGGGATTCAG
TTCCCCGAGG TGGTGGCCGA GCTAGCCGAC CTCCTGGTGC GGCTGGAAGG GACCGATACG
GTGCTTTGCC TCGGGCACTA CAGCGCCGAA CTCGTTCTCT CCATCAGGAC CTCGAACGAG
GAGATAAACG CCGGCGAATT GATCCGCAAG CTGGTCGCCG GTATCGGCGC TGCAGGCGGC
CACGGCATGA TGGCCGGCGG CAAGATCGAC TTGAGCGACA ACTCGGAGCA GGCCATTCAT
GAGCTGGAGA ACCTGCTCAC CGAACGGCTG CTGGCCGAGC TGAAGATTTC CGATCTGAAA
CCGGTGCCGC TGGTCCCCTG A
|
|---|
| Protein sequence | METSTKPPDL LAYTDSLLTW VSGRGRILIV VHDNPDPDSL ASAMALRHFF AVKLNREAVI
AFSGMIGRSE NLAMAKLLQI PLTPLPLIDL KCFQVVCLLD TQPGTGNNSL PAGMRTDIVI
DHHPMRESSA ACRWVDIRPD YGTTATILFE YLKVQGVSIG TKMATALFYA IKSETQDLGR
EARRADRDAY LDLFPLANKT LLNSITRPSL PREYFISLHN ALEHAALYGK VLVASLKGIQ
FPEVVAELAD LLVRLEGTDT VLCLGHYSAE LVLSIRTSNE EINAGELIRK LVAGIGAAGG
HGMMAGGKID LSDNSEQAIH ELENLLTERL LAELKISDLK PVPLVP
|
|---|
| |