| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2235 |
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| Symbol | |
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| ID | 6782231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2600021 |
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| End bp | 2602549 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642768231 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_002139043 |
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| Protein GI | 197118616 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAATA CCGAAACTGA CATCCTTTGC GCCCCCGGAC TTGAAGACCT GCCTCCTCTG
CCGATGGACG CGAAGAGCCT TGTGAACGAT TTCACCCACC ATTACTTTCA TCACCTCGGA
AGAGACAGGA ATTGCCGCAA CATCCGCTAC AACTACCAGG CACTGGCCTT CACGGTCCGG
GAGCGCCTGA TCGAGCGCTG GAACAACACC CGCTACGCCT ACATCGATGC AGATACCAAG
ACCGGTTACT ACCTCTCGCT CGAATTCCTC ATGGGGCGGG CGCTGGGAAA CGCCATGCTG
AACCTGGGGC TTGACGACGC CGCCCACAGG GCGATGGAGC AGCTCGGCAT CCGCCTGGAG
CAGGTGGCGG AGGAGGAGAT CGACGCGGGG CTCGGCAACG GCGGCCTGGG AAGGCTCGCC
GCCTGTTTCC TCGACAGCTG CGCCACCTTG CAGCTCCCGG TGATGGGGTA CGGCATCCGC
TATGAGTACG GCATGTTCCG CCAGCGCATC GAAAACGGCA GGCAGGTCGA GGAGCCGGAC
CACTGGCTGC GCGACGGCAA CCCCTGGGAA ATGGAGCGCC CCGAGTACAC CCAGCGCATC
CGCTTCGGCG GGCGGACCGA GTGCAGCCGC AACGACGACG GGAGCCTCAC CCACCGCTGG
CTCGACACCC ACGACATCCT CGCCGTTCCC TACGACCTCC CCATCCCGGG GTACAAAAAC
GGAACCGTCA ACACGCTTAG GCTCTGGAAA TCTGCCGCCA CCGACGCCTT CGACCTCCAA
GAGTTCAACG CCGGGAGCTA CACCGAATCG GTGGCCATGA AGAACGAGGC GGAGAACATC
ACCATGGTGC TCTACCCCAA CGACGCCAGC GAGAACGGCA AGGAGCTGAG GCTCAGGCAG
CAGTACTTCC TCGCCTCGGC GAGCCTGCAG GACGTCCTTG CCCGCTGGAA GCAACGGCAG
GGAGAGGTGT TCGGCCACTT CGCCGAGAGG AACGTGTTCC AGCTGAACGA CACCCACCCA
AGCTGCGCCG TCCCCGAGCT GATGCGGCTG CTCATGGACG AAAAGGGTAT GGGATGGGAC
GAGGCGTGGT CGGTCACCAC CCGCACCATG GCCTACACCA ATCACACCCT GCTCCCCGAG
GCGCTGGAGA AGTGGCCGGT GCCGCTTTTC AGGCAGCTTT TGCCGCGCCT TCTGGAGATC
ATCCTGGAGA TAAACGCGCG CTTTCTTGCC GAGGTCTCCA GCCGCTGGCC CGGCGACAAC
GAACGGCTGC GCAACATGTC CATCATCGAG GAGGGGCCGG TGCCGCAGGT GCGCATGGCC
TACCTCGCCA TCGTGGGGAG CTTCTCGGTG AACGGCGTCG CCGCGCTCCA CTCGCAACTC
TTGGTGCAGG GGCTTTTCAG GGACTTCTAC GAACTTTGGC CGGAGAAGTT CAACAACAAG
ACCAACGGCG TCACCCCGCG CCGCTGGCTG GTCAAGTGCA ACCCCGGGCT TGCCTCGCTC
ATTGCCGGCA GGATAGGGGA GGGGTTCATC GCCGACCTGG GAAGGATCTC GCAGGTGGCA
CCCCTGGCTG ACGATCCCGA ATTCCGCAGT AAATGGCACG CCGTGAAAAA GGCCAACAAG
GAGCGGCTCG CCGCAGTTGT CCTCGACCAG TGCGGGGTCC CCTTCAACCC TGAGAGCCTC
TTCGACGTCC AGGTAAAAAG GATTCACGAG TACAAGCGCC AGCTCCTGAA CGTGCTGCAC
GTGATCCATC TCTACGACAG GATCAAGCGC GGCGACACCG GGGAATGGAC CAACCGCTGC
GTGCTGATCG GCGGCAAGGC GGCGCCGGGG TACCACATGG CGAAACTGAT CATCAAGCTG
ATCGGCAACG TCGCCAAGGT CGTGAACGAG GATCCACTGG TCGGGGACCG GCTCAAGGTC
GCGTTCTTCC CCAACTACCG GGTGACCGCC ATGGAGGTGA TCTGCCCGGG AACCGACCTC
TCCGAGCAGA TCTCCACCGC CGGCAAGGAA GCATCCGGGA CCGGAAACAT GAAGTTCATG
ATGAACGGCG CCATCACCAT CGGCACGCTG GACGGCGCCA ACATCGAGAT CCGGGAGGAG
GTGGGGGACG AGAACTTCTT CGTCTTCGGC CTGACCGCCG AAGAGGTGGA GCATCAGCGC
CGCAGCTACA ACCCGGCCGG CATCATCGCA GCCGATCCCG ACCTGAACCG GGTGCTGCAG
TTATTGACCA GCGGCCACTT CAACATGTTC GAGGCGGGGC TCTTCGACCC CATCATCCAG
GCGATCGTGA ACCCGGGCGA TCCGTGGATG GTCGCGGCTG ACTTCCGCAG CTACGTGCAG
GCGCAAAAGC GCGCGGCCGC AGCCTATCTG GACCGGGAAG CATGGACCCG GATGAGCATC
GTCAACAGCG CGCGCAGCGG CAAGTTTTCC ACCGACCGGA CCATAGCCGA GTACAACGAG
GAGATCTGGC GCCTGAGGCC GGTACGCCCC TTGCCGCTCG TACCGTCGGA GCCTAATGGG
AAGCTCTGA
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| Protein sequence | MANTETDILC APGLEDLPPL PMDAKSLVND FTHHYFHHLG RDRNCRNIRY NYQALAFTVR
ERLIERWNNT RYAYIDADTK TGYYLSLEFL MGRALGNAML NLGLDDAAHR AMEQLGIRLE
QVAEEEIDAG LGNGGLGRLA ACFLDSCATL QLPVMGYGIR YEYGMFRQRI ENGRQVEEPD
HWLRDGNPWE MERPEYTQRI RFGGRTECSR NDDGSLTHRW LDTHDILAVP YDLPIPGYKN
GTVNTLRLWK SAATDAFDLQ EFNAGSYTES VAMKNEAENI TMVLYPNDAS ENGKELRLRQ
QYFLASASLQ DVLARWKQRQ GEVFGHFAER NVFQLNDTHP SCAVPELMRL LMDEKGMGWD
EAWSVTTRTM AYTNHTLLPE ALEKWPVPLF RQLLPRLLEI ILEINARFLA EVSSRWPGDN
ERLRNMSIIE EGPVPQVRMA YLAIVGSFSV NGVAALHSQL LVQGLFRDFY ELWPEKFNNK
TNGVTPRRWL VKCNPGLASL IAGRIGEGFI ADLGRISQVA PLADDPEFRS KWHAVKKANK
ERLAAVVLDQ CGVPFNPESL FDVQVKRIHE YKRQLLNVLH VIHLYDRIKR GDTGEWTNRC
VLIGGKAAPG YHMAKLIIKL IGNVAKVVNE DPLVGDRLKV AFFPNYRVTA MEVICPGTDL
SEQISTAGKE ASGTGNMKFM MNGAITIGTL DGANIEIREE VGDENFFVFG LTAEEVEHQR
RSYNPAGIIA ADPDLNRVLQ LLTSGHFNMF EAGLFDPIIQ AIVNPGDPWM VAADFRSYVQ
AQKRAAAAYL DREAWTRMSI VNSARSGKFS TDRTIAEYNE EIWRLRPVRP LPLVPSEPNG
KL
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