| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2059 |
|---|
| Symbol | |
|---|
| ID | 6782053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2372276 |
|---|
| End bp | 2373358 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642768054 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002138868 |
|---|
| Protein GI | 197118441 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATTCG GACTTTTCAA GAAGAAGGAT CATCGTTACT ACCAGACCCA GGGCGCAAAG
TTCCTGGCGG CGGAGCGCTA TGCCGACGCC CGGGTCGACT TTCTCGAAGC GCTGAGGCTT
TGCCCGGCTG ACGCCGCCAA CGACCAGGGC GAGATCCGCC AGGGGCTCGA CCACTCGGGA
AACCGCCTGG GCGAGCTCAA CCTGGAGGAG GGGGAGCATT CCCTGAACCA GGGTGAGCTG
CAAAAGGCGT TCGACCACTT CACCCTTGCT GGCGAACTGG CAGCGGACCA GGGGATCAAG
GCCAAGGCAA CGGCGGGGCT TGCCAGGGTG CAGCAGGGGG ACGCGCCCCA GTCCGCGCCC
GTTGCCGCAG CCGCTGCTCC CACGGCTGCC GCCGCTCCCG CGAAGGAAGT TGCCGGCCCC
TACAAACCGC ACGGCGGAGG CTCCTGCACC TCCTGCGGCA CCCATGCACA CCACAAGCCT
CTGGAGGCTG AGCCCGCCGG ATTCGATCTC GCGGAAGAAG ACCAGTTCCA CCTCATGGTG
GCGCCGCTTC CCGGCGACCT CCCCGCCCGT TACGGCGCCA TGGGGAGCAA ATTCGCCCAG
GCCTATCTCA TGATACACGA CGGAAAGGAC GCTAATGCAC TTCCCGTTTT GCAAGAAATG
CTGTTATCTG GTGAAAATGA CATTGTATTA TACGAAGTGG CACTTATAAT GTTTAGGGCC
GGGCGCATTC ATGAGAGCGA GGGACTTCTG AATCGTGCTC TGTTGGTCAA CTCGCAAAAC
GGCATGGTTT ACCTGGCGCT GGTGCAACTT TTGGCCGGCG GCGGCAGGTA TGCCGAGGCG
ATCGCCCTGG TTGAACGGAT GCAGGCAGAA GACGTGATGG CGGACCAGGC GCAGTTCATA
CTGGGCGAGC TCTACGAGAC GACGGGGGAC GAGGCGAAGG CGATCGAGAT GTGGTCGAAG
GCGCTGGAGA TGCCGACCGT GGCGCGCGCA GCCGCCGAGA AGCTGGTCCC GATCCTGGGA
AGCCAGGGAC GTACCGAGGA AGTCAAATAC CTAGCCAAAA AGTACTTAAA AGGATGCTGC
TAA
|
|---|
| Protein sequence | MLFGLFKKKD HRYYQTQGAK FLAAERYADA RVDFLEALRL CPADAANDQG EIRQGLDHSG
NRLGELNLEE GEHSLNQGEL QKAFDHFTLA GELAADQGIK AKATAGLARV QQGDAPQSAP
VAAAAAPTAA AAPAKEVAGP YKPHGGGSCT SCGTHAHHKP LEAEPAGFDL AEEDQFHLMV
APLPGDLPAR YGAMGSKFAQ AYLMIHDGKD ANALPVLQEM LLSGENDIVL YEVALIMFRA
GRIHESEGLL NRALLVNSQN GMVYLALVQL LAGGGRYAEA IALVERMQAE DVMADQAQFI
LGELYETTGD EAKAIEMWSK ALEMPTVARA AAEKLVPILG SQGRTEEVKY LAKKYLKGCC
|
|---|
| |