| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2017 |
|---|
| Symbol | |
|---|
| ID | 6782011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2322156 |
|---|
| End bp | 2323199 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642768012 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit II |
|---|
| Protein accession | YP_002138826 |
|---|
| Protein GI | 197118399 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATC CGGTAATTCT CGCTGCCATA GTCCTCGTTG CCGGCCTTCT CATGTACGCG
CTCTTCGCCG GTGCCGACTT CGGCGGAGGC ATCTGGACCG CTCTCGCTTT CGGGCCGCGC
GCGCGGGAGC AGAGGGAAGC GCTCTTCAAC GCCATCGGCC CGGTGTGGGA AACGAACCAC
GTATGGCTCA TCTTCGTGAT TGTCACCCTC TTCACAGCCT TTCCCGCCGG TTTCGGCAAC
CTCTTCGTCG TGCTGATGAC CCCTTTGGTG TTGGCCCTGG TTGGGATCAA CTTCAGGGGC
GCTGCCTTTG CCTTCCGCCA CTTCGGCAGG GAGTCGAAGA AAGAGACCCC AGTCAGCGCC
CGCGTCTTCG AGATCGCCAG CGTGCTCACG CCCTTCACGC TGGGGCTCGC GGTATCCGCC
ACCGCTGCCG GGAGGATCGT CATCGCCGGG CACATGCCGA CCGAACACGT TTCCGCCTGG
CTCAACCCCT TCACCCTATT GGGCGGGGTG GTCGGCATGG CGATCTGCGC CTACTTGGCG
CCGGTTTACA TGACGGTGCG CGTCACGGGG AGCCTGCAGG AGGACTTCAG GAAGGAGTCA
CTGATTGCCG GGTTGGCCCT GGGCATTCTC ACCTCGCTGA TGATACCGCT GGCGCACTAC
CAGGCGCCGC TTTTCGCCGA AAGGCTGTTC AACTCGTGGC CCATGCTGTT CGTGATGTTG
GCGATACTTA CCGGCGTGAT CACCGAGTCT TTGCTCTGGC TGCGGCGCTA CTTCTGGGCG
CAGCTTATGG CCGGCGCGAC CATCGTCTTC ACCATGGCTG GCTTCATTGC GGCGCTCAAT
CCCGATATCC TGATCGGGCA ATTGACCCTG CGTGCCGCCG CGGCGCCGCA TACGACCCTG
GTCGCATTTC TAGCCGTTCT GCCGATTGGG GCTTTGATCC TGGTTCCTTC GCTGGTTTAC
CTGTACTGGA CTTTCAGGGG GGAGCCGTCC ACCGATATGC CGCCGGCTGG GAAGGGTGGG
GGACAGGGCG CGCCCCCTCC CTGA
|
|---|
| Protein sequence | MADPVILAAI VLVAGLLMYA LFAGADFGGG IWTALAFGPR AREQREALFN AIGPVWETNH
VWLIFVIVTL FTAFPAGFGN LFVVLMTPLV LALVGINFRG AAFAFRHFGR ESKKETPVSA
RVFEIASVLT PFTLGLAVSA TAAGRIVIAG HMPTEHVSAW LNPFTLLGGV VGMAICAYLA
PVYMTVRVTG SLQEDFRKES LIAGLALGIL TSLMIPLAHY QAPLFAERLF NSWPMLFVML
AILTGVITES LLWLRRYFWA QLMAGATIVF TMAGFIAALN PDILIGQLTL RAAAAPHTTL
VAFLAVLPIG ALILVPSLVY LYWTFRGEPS TDMPPAGKGG GQGAPPP
|
|---|
| |