Gene Gbem_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1818 
Symbol 
ID6781807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2102337 
End bp2103140 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content64% 
IMG OID642767810 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_002138629 
Protein GI197118202 
COG category[R] General function prediction only 
COG ID[COG1099] Predicted metal-dependent hydrolases with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTAA TTGATCCCCA CATGCATCTG GTCTCCCGGA CCACCGACGA CTACCTGGCC 
CTTGCCTACG GCGGGATCCA CACCGTCGCC GAACCAGCCT TCTGGCCCGG TTACGACCGC
GCCTCCGCGG CGAGCTTCCA CGATTACTTC AACCAGTTGA CCGTGACCGA GCCCGCCCGC
GCCGCCCGCT TTAAGATCGC TCACTACTGC TGGATCGGGA TGAACGCGAA GGAAGCTGAG
CACTTGGAGC TTGCCCGCGA GGTGATTGCC ATGCTTCCGC AGTACCTGGA CCGCCCGAAC
GCGCTCGGCA TCGGCGAGGT GGGGCTCAAC AAAAACAGCC GCAACGAGAT CGCCATCTTC
GAGGAGCAGG TGGAACTTGC CGCCCGCCGC AACGAACTCC TGCTGATCCA CACCCCGCAC
CTGGAGGACA AGCTCAAGGG GACCCGCATC ATCATGGACA TCCTCAAGAA CGAGCCGCGC
GTCAAACCGG AGCGGGTGCT GATCGACCAC GCCGAGGAGC ACACCATCGG CGAGATCAAG
GACAACGGCT TCTGGTACGG CCTCACCCTC TACCCCGACT CCAAGGGGAG CCCCGCCCGC
GCCATCGATG CCGTGGAGAT CTTCGGGCCG GACCGGATCT GCATCAATTC CTCGGCGGAC
TGGAGCGTCT CGGACCCCAT CGCCACCTTG AAATGCGCCA ACGAGATGCG GCGGCGCGGC
CACCCTGAAG CGCTGGCCGA GCGGGTCTTC TTTGAGAATC CCCGGGATTT CCTGGGGCAG
TCCCCGAAGT TCGTCCTCCC CTGA
 
Protein sequence
MRVIDPHMHL VSRTTDDYLA LAYGGIHTVA EPAFWPGYDR ASAASFHDYF NQLTVTEPAR 
AARFKIAHYC WIGMNAKEAE HLELAREVIA MLPQYLDRPN ALGIGEVGLN KNSRNEIAIF
EEQVELAARR NELLLIHTPH LEDKLKGTRI IMDILKNEPR VKPERVLIDH AEEHTIGEIK
DNGFWYGLTL YPDSKGSPAR AIDAVEIFGP DRICINSSAD WSVSDPIATL KCANEMRRRG
HPEALAERVF FENPRDFLGQ SPKFVLP