| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1536 |
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| Symbol | |
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| ID | 6781524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1781618 |
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| End bp | 1786324 |
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| Gene Length | 4707 bp |
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| Protein Length | 1568 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642767530 |
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| Product | Tfp pilus assembly protein tip-associated adhesin PilY1-like protein |
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| Protein accession | YP_002138350 |
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| Protein GI | 197117923 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAACC GAATCGAGAA GCTCTTGATA AAGACCGCCT GCCTGATCGC GCTGGCCGCA
ATGCTCATTC CCGCCGTGGC CTGCGCGGAG GATGCCGGCA ACCCTTACTG CATGGCGCCG
CCGTTTATCT CCGGGGGAAT CAAGCCGAAC CTGCTGATGC TTATCGACAA TTCCTCCAGT
ATGTATGACA TGGGGTACAT CGCCGGATCC AACGGGACCG TACCTACCTA CAGCTGTGGC
AGCAACCTCG TCAGTTCGGC CTACTGCTTC GACAACACCT ACGACGACAC CAAGGAGTAC
GAAGGGTACT TCTCGACCTT CGACCCCATC GCCAACAGCA GCAACTACCC GTTCTACCAG
TACTCCGGCG GGAAATTCTC CGTGGTCGCA GGGCTTCCCG CCACCGCGGC GGACAACGTC
AACATCTTCA AGACCAGCTA CGTCTACGTG GCGCTTTCCG GCGACGCCAG CGCCACCCCC
TCCACCAGGA CCGTCTCCAC CTTCGTCGCC AGCGGCAAGT TCCTCAACTG GCTTTCCGCT
TCCAAGTTCG ACATCGAGAA GAAGATCCTC ACCGGCGGGA AGTTCGACCC AACTACGAGC
ACGCTCAAGG GGGAGTCGAG GGGATGCGTG GGCAGGAGAT TCGTGAAGGT GCTCCCGGCC
ATTCCCAAGC TCTCCTTTGC CGTCAGGGGG CCCACATCGG TCGAGCCGAA CTTCGACCCG
CGCACCCAGG GGGGGCAGAG CACCATCGAG ATCTTCGAGG GAACCTACAA CGCCACCGCT
TGCCAGTGTG CGGTCTACAA CTGGAGCAAC GGCAGCTACG GCCAGGCCTC AACGGACACG
AAGAGTTGCC TGGGCGCCTC GCCCGCGGAC AACGCGCTGG CGACCCTGAA CCATACCCAG
CAGACCTGCT ACGTGCTGAA GAAGAAGTTC GCCGACCCCA CCACCAGCTA CGACTCGGAC
GGCTGGCCCA CCACGGGACT CAACTTCAAC GACATCAAGG TTGCCTGCAA CAACGTCTAC
CTGGACAACA AGAATCCCAT CGCGCCCGCG GCCTTGACCG ACGAGTCGAA CGGCAACTAC
ATCTGTACCA GCGCGGCGGT GCACGGGATT CCCACCGGGC GCTACATAGG TCCGGGCTCA
GACACCACGG GGTTCGTGGG GAGGTGCTGG AACGGCTCTT CCGACAAATT CGGCTCGGGG
GCCGGATCCG ACACCTGCAT CAAGCGTGAG ATCCTGCACT ACTGCATGGG GACGAACTTC
GCCGAGGTAA CCGACCCCAC CAGCATCATC CCCAGTAGCG GCAATATCCC CGCCGTCATC
ATGGACGCGG GGGTGCGAGC CATCGGGGCG CCGGTCGGGG TGTTCGATGC CAAGGTCGCC
GTCACTTCAG CGCCCAGCGG GTTGGTGCAG CAGTTCTCCG AGGATATACG CTTCGGCGCC
ATGAAGTTCA ACGACTTCGG CTCGACCACG GAGTGCGGCA GCACCGCGCT TCCTTGCCCC
GCAAGCGGCG TGACCAACAA GGACGCCAGC ATGATGATGA CGAACTCCTA CATAGGGTCG
TCCATCGGCG ACCACAGCTC CGGAATCGTC AAGGACATAG ACGACGTTGT GGCCAAGACC
TGGACTCCCT TCGCCGAGGG GTACTACAAC GCTATCGCCT ACTTCGTCAA GGACGCCACC
GCTACCACAC CGACGCTGAG CTCCACCAAG TTCACTGCGC GGACCACGGC GCCCGCTTCG
ATCGCGGCGC CGGTCAACAG CACCGACTTC GACGCCAACA GAAACCCGAT TCAGTTTCGC
TGCCAGCAGA ACAACATCCT GATCATCACC GACGGCTCCT CAACGGCAGA CCAGAACGCC
ACCGTGATGG GCAAGGTGCT GGAGGGGGGG ACCGACGGCG TCTTCCGCGA TCCCAGCACC
ACGGCTGAGG CGACCACTTG CGGGAGCTAC TCCGGCAGTC CTTTCCTCCA CGACCTGAGC
TACTTCGCCA AGCACCGCAA CATCTTCAAC CCGAGCCAGG TCTGCGATCC GGTCGGTACC
GATCTGTGCG AGGCGGCGCA GACAATCAAG ACGCACGTGG TCTTCAACGC CCCACCCAGT
AGCAACACCA CCGACGTGTG CGACTCCTAT AACCAGATGA GGTTGACGGC CCTAAACGGC
GGCACCACCG TGAACAGCGC CGCCGACCCA GCCGACTTGC GCACCGCACT GAAAACGGCC
CTGGAGAACG TCGCCGCCGG CGCCTCCTCC GGTACCGCCG CCTCCATCCT CAGCAACAGC
GAGGGGAGCG GGGCCAACAT CCTGCAGGCG GTGTTCTTCC CGAAGAAGGT TTTCGAGAGC
CAGACCAGCG TCGACTGGAT CGGAGAGATG CAGAACCTGT GGTACTTCGT CGACCCCCAG
ATCAGCCATA GCACCATCAG GGAAGACACC CCCCCGGGCG ACCTGCTGAA GCTCAACCTC
CAGCACGACA AGGTGGTGAG CTTCCGCTTC AGCACCGCCG ACAACACCAC CTACGGCTAC
CTGTCCCAAG ACACAAACGG CGACGGCATA GCGGACACGG CCGAGACGAA GGTGGACGCG
GACGACGTCA ACAGCCTCTG GCGCGCCGGC AAGATCCTCC ACGCCCGCAA CGTGCTCTCC
GATCCCAGGA ACCTCTACAC CCCGCTCATC AGCGGCGGGA CGGAGCTGGG CAGCACCGGG
CTGATGCGTT TCAGCTACGG CGAGGGGGAT CCGGTGCGGC CGGACCATTC CACGCTCTTG
ACCCCTTACC TGCAGGCGAG CTCCGCGGCC AACGCCCGCG ACATCATGAA GTACGTCCAG
GGTTTCGATA ACGCCACCAT GCGCAGCCGG ACCGTCAAGA AGTGGGGTAT TCCCGCAGGC
ACCGTGGGGA GCTCGACCTA CCTCGACGAC GCCAGGTTGA GGGGGATCGG CGTGTGGAAG
CTGGGGGATA TCATCTCCTC GACCCCGCGC ATCCAGTCGG TCAGCAAGCT GAACACCTAC
AACCTCCCCG CACCCAGCGG CTACAGCGAC AGTTCTTACA GCTCGTACAT CGGCTCCAAC
GAGTACAAAG GGCGCGGCAT GGTCTACGTG GGGGCCAACG ACGGCATGAT GCACGCCTTC
AAGCTGGGGC TCTTGCGGGT GAACGCCAGC GGCTTCGAAA AGGCAAGCAT CGACCCCGAC
CCGGACCTCG GCAAGGAGAT GTGGGCCTAC ATCCCGAAGA ACGTGCTCCC CTATCTCAAC
TACTACCCGG CCTCCAACTA CCATCACCTC TACTACGTGG ATGGGGCGAG CCTTCTTTTC
GACGCCAGCA TAGGCACACG TACCGCCGCG TCGGGCGGGT GCACAGCCGC CAACTACTGG
GAGTGCACGA AGCTCTCCTC GGTGGTCGAC AGCAGCAACA ACCTGAACAG CGGCAACACC
TGGAGAAGCG TCCTGATCGG CGGGATGGGG TTGGGCGGCG CCTCGACCAA GACCTGCGCC
AGCGGGTCCA ACTGCGTGCA GACACCGATT ACAGATCCCG CCAACGGCAG TCTCGGGTTC
GGCTACTCGT CCTACTTCGC CTTGGACGTC ACCACCCCGG CCTCTCCCAA GCTGCTTTGG
GAGTTCAACC ATGCCGATCT CGGGTTTGCC ACCTCCGGCC CGGCAATCAT CCGGGTAGGA
CCCAGCAATA CCAATGGGCA CTGGTATGCC GTCTTCGGCT CCGGCCCCAC CGGCCCGGTC
GACACCGAGA ACAACCAGTT TATGGGGCGC TCCAACCAGA CCCTCAAGTT CTTCATAGTC
GACCTGCTGA CCGGGAATCT GGAACACACC ATCGACACCG GTATAACGGA CGCCTTTGCC
GGCTCGATGA TTGGGTCGGC CATAGATGCA GACCGTTGGA ACCAAGGCGT CACCGGCAAT
TATCAGGACG ACGCCATCTA CGTCGGGTAC ACCAAGAAGG TCTCCGGCAC CCCCGACACC
TGGACCAACG GCGGCGTGAT CAGGATCATG ACCAAGGAGA GCTCCACCCC CTCAACGTGG
GGGTGGAGCT CGGTGATCGA AAACACCGGC CCGGTTGTCA CGGCCATTGC CAGACTGCAG
GACCGCAAAA ACAAGAGGCT CTGGCTCTAC TTCGGCACCG GCAGGTACTA CTACCGCTAC
GGCAGCACAG TCGATGACTT CAGTTCCAGG CGCGCCATCT ACGGCATCAA GGAACCTTGC
TACAACACCA ACGGACGTCC GGGGAACTAC CTCGACAAAG ACTGCTCGGC GACCATAACC
AGCGGGGTTA CCAACCAGTC CGATTCTGTA ACCGCCGTTG GCGCCGGCGG CTGGAAGATC
GACCTGGCCA ACTCCACGAC CGCCAACGGC GCCGAGCGAG TGGTGACCGA CGCGGTGGCG
CTAACCAACG GGACCGTGTT CTTCACCTCC TTCGCGCCGA CGGCCGACGC CTGCGGTTTC
GGTGGGAACT CGTATCTCTG GGGGCTCGAT TATGGCACAG GCGGACGACC CGATGATGCG
GCGCTGGTCG GCAAGGCGCT GATCCAGCTC TCCACCGGCG AGTTCAAGGA GGTGGATCTC
GCCGAGGCCT TCGGCGCCGG TTCAGCTCGA CTGGGGCGGG TAACGGGAAT CCCGATGACC
GGGAAGCCTC CGGCTGACGC CTTCCCCATT GTGACCAAGA GCGGCAACAA GCCGGTCAAG
CGGATCATGC ACATACAGGA GCGGTAA
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| Protein sequence | MGNRIEKLLI KTACLIALAA MLIPAVACAE DAGNPYCMAP PFISGGIKPN LLMLIDNSSS
MYDMGYIAGS NGTVPTYSCG SNLVSSAYCF DNTYDDTKEY EGYFSTFDPI ANSSNYPFYQ
YSGGKFSVVA GLPATAADNV NIFKTSYVYV ALSGDASATP STRTVSTFVA SGKFLNWLSA
SKFDIEKKIL TGGKFDPTTS TLKGESRGCV GRRFVKVLPA IPKLSFAVRG PTSVEPNFDP
RTQGGQSTIE IFEGTYNATA CQCAVYNWSN GSYGQASTDT KSCLGASPAD NALATLNHTQ
QTCYVLKKKF ADPTTSYDSD GWPTTGLNFN DIKVACNNVY LDNKNPIAPA ALTDESNGNY
ICTSAAVHGI PTGRYIGPGS DTTGFVGRCW NGSSDKFGSG AGSDTCIKRE ILHYCMGTNF
AEVTDPTSII PSSGNIPAVI MDAGVRAIGA PVGVFDAKVA VTSAPSGLVQ QFSEDIRFGA
MKFNDFGSTT ECGSTALPCP ASGVTNKDAS MMMTNSYIGS SIGDHSSGIV KDIDDVVAKT
WTPFAEGYYN AIAYFVKDAT ATTPTLSSTK FTARTTAPAS IAAPVNSTDF DANRNPIQFR
CQQNNILIIT DGSSTADQNA TVMGKVLEGG TDGVFRDPST TAEATTCGSY SGSPFLHDLS
YFAKHRNIFN PSQVCDPVGT DLCEAAQTIK THVVFNAPPS SNTTDVCDSY NQMRLTALNG
GTTVNSAADP ADLRTALKTA LENVAAGASS GTAASILSNS EGSGANILQA VFFPKKVFES
QTSVDWIGEM QNLWYFVDPQ ISHSTIREDT PPGDLLKLNL QHDKVVSFRF STADNTTYGY
LSQDTNGDGI ADTAETKVDA DDVNSLWRAG KILHARNVLS DPRNLYTPLI SGGTELGSTG
LMRFSYGEGD PVRPDHSTLL TPYLQASSAA NARDIMKYVQ GFDNATMRSR TVKKWGIPAG
TVGSSTYLDD ARLRGIGVWK LGDIISSTPR IQSVSKLNTY NLPAPSGYSD SSYSSYIGSN
EYKGRGMVYV GANDGMMHAF KLGLLRVNAS GFEKASIDPD PDLGKEMWAY IPKNVLPYLN
YYPASNYHHL YYVDGASLLF DASIGTRTAA SGGCTAANYW ECTKLSSVVD SSNNLNSGNT
WRSVLIGGMG LGGASTKTCA SGSNCVQTPI TDPANGSLGF GYSSYFALDV TTPASPKLLW
EFNHADLGFA TSGPAIIRVG PSNTNGHWYA VFGSGPTGPV DTENNQFMGR SNQTLKFFIV
DLLTGNLEHT IDTGITDAFA GSMIGSAIDA DRWNQGVTGN YQDDAIYVGY TKKVSGTPDT
WTNGGVIRIM TKESSTPSTW GWSSVIENTG PVVTAIARLQ DRKNKRLWLY FGTGRYYYRY
GSTVDDFSSR RAIYGIKEPC YNTNGRPGNY LDKDCSATIT SGVTNQSDSV TAVGAGGWKI
DLANSTTANG AERVVTDAVA LTNGTVFFTS FAPTADACGF GGNSYLWGLD YGTGGRPDDA
ALVGKALIQL STGEFKEVDL AEAFGAGSAR LGRVTGIPMT GKPPADAFPI VTKSGNKPVK
RIMHIQER
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