Gene Gbem_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1460 
Symbol 
ID6781447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1689687 
End bp1690862 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content65% 
IMG OID642767453 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_002138274 
Protein GI197117847 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.172514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATG TCTATGTCAT CGAATCACTG CGTACCCCGT TGGGCTCCTT CGGCGGAGCG 
CTGAGCGACG TAGAAGCGCC GCGTCTCGCC GCCACCGTCA TCACCGGCAT CATGGAACGC
ACAGGGCTTC CCGCTGAAGC CATCGACGAG GTGATTGTCG GCCAGGTTCT CTCCGGCGGC
TCGGGGCAGG CTCCCGCGCG TCAGGCCATG CGCTATGCGG GGCTCCCCGA CACGGTCCCC
GCCCTCACCA TCAACAAGGT CTGCGGCTCG GGCCTTAAAG CCATCATGCT CGGCGCCGGT
TCCATCAAGC TTGGCGACGC CCAACTGGTG CTCGCGGGCG GCATGGAGAA CATGTCACTT
GCCCCCTACG CGCTCAGCAA AGGTCGCTAC GGCTACCGCA TGGGGAACGG CGAGATGCTG
GACCTGCTGG TCCACGACGG CCTGACCGAC CCCTACAGCG GCAAGCACAT GGGGGTGATA
GCGGAGCAAA GCGCCGGCGA CAACAAGCTG GACCGCACCC TCCAGGACAG CTTCGCGCTC
GCCTCCTATC AGAAGGCTCA AGCGGCTCTG AAAGACGGGA TCTTCAACGA CGAGATAGTC
CCGGTGGTGA AGAAGACGCG CCAGGGCGAG GTGGTCGTCC GCGAGGACGA GGAGCCGCAC
AAGGTCGACT TCAAGAAACT CCCGGAGCTC CGCGCCGCCT TCCAAAAGGA CGGCACCATC
ACCGCGGGTA ACGCCTCTAC CATCAACGAC GGCGCCGCCA TGGCGCTTCT GGCGAGCGGC
GAGGCCGTGG CCAAATACGG GCTGAAGCCC AAAGCCCGCC TGGTCGCCTA CGCCACCAAC
AGCGTCCATC CCGACCAGTT CGCCGAAGCC CCGGTAGGCG CCATCGCCAA GGTCTGCGCC
AAGGCCGGGC TCACTACCGA CGACATCGAC CTCTTCGAGA TCAATGAGGC CTTCGCCGCG
GTCCCGCTCA TCGCCTGCCA AAGGCTGCGC CTCGATCCGG AGCGCGTCAA CGTGAACGGC
GGCGCGGTGG CGCTCGGCCA CCCGCTAGGC GCAAGCGGTG CGCGCATCAC CGCCACCTTG
GTGCGGGAAC TTCACAAACG CAAACAACGC TACGGTCTCG CCACCCTCTG CATAGGCGGC
GGCGAGGCGG TCGCGGTAAT CCTGGAAAGG GTTTAG
 
Protein sequence
MSDVYVIESL RTPLGSFGGA LSDVEAPRLA ATVITGIMER TGLPAEAIDE VIVGQVLSGG 
SGQAPARQAM RYAGLPDTVP ALTINKVCGS GLKAIMLGAG SIKLGDAQLV LAGGMENMSL
APYALSKGRY GYRMGNGEML DLLVHDGLTD PYSGKHMGVI AEQSAGDNKL DRTLQDSFAL
ASYQKAQAAL KDGIFNDEIV PVVKKTRQGE VVVREDEEPH KVDFKKLPEL RAAFQKDGTI
TAGNASTIND GAAMALLASG EAVAKYGLKP KARLVAYATN SVHPDQFAEA PVGAIAKVCA
KAGLTTDDID LFEINEAFAA VPLIACQRLR LDPERVNVNG GAVALGHPLG ASGARITATL
VRELHKRKQR YGLATLCIGG GEAVAVILER V