| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1141 |
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| Symbol | |
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| ID | 6781120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1318771 |
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| End bp | 1320333 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642767128 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002137957 |
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| Protein GI | 197117530 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATA AAGATCTCAC TACCGATTCA GGCGCGCGCA AGCAGGAGCC CGGGCAACTG
CAGGGGGACC TACCCTTTCG GCTGCTGGTG GAGCAGGTGA AGGAGTACGC AGTGGCGCTT
TTGGATCCGC AGGGAAACAT CTCCTCGTGG AACGCCGGGG CCGAGCAGAT TACCAAGTAT
CGGGGCAGCG AGGTGATCGG GAAGCATTTC TCGCTGCTCC ACCCCAAGGA GGAACTGCGT
TCGGGGGCGC CGGAAAGGGA GCTCGCCATT GCACGCTCGC TGGGGAGCCT GGACCTGCAG
GGGTGGCGAC TGAAAAAAGA CGGTAGCCGC TTCTGGGCCG CAATCACGCT CACCGCGCTC
TACGATCAGG GAGAAAACCT CGCCGGGTTT GCGCTGATAG CACACGACAA CACGGAGAAA
CGCGCTTCTG ACGAGGCGCT GGTGAAAAGC CGCAACATGC TGGAGCGGCT CTTCGAAACG
GCTCCGGACG GCATCGTAGT GGTCGACGAC AACGGTGTCA TTCGCAGGAC GAACCAGCAG
GCGGAGATCA CCTTCGGCTA CATGCGTGAG GAGATGCTGG GGCAGCGCAT CGAGCTCTTG
GTCCCGGAGC GTTATCACAA GCACCATCGC CAACACCGGC GCAACTATTT CGCCGACCCG
CGCGCCCGCA AGATGGGGAT CGGCCTCGAA CTGTACGGCC GCCACAAGGA CGGTCACGAG
ATCCCGGTAG ACATCATGCT AAACCCCATC GAGACGCCGG ACGGGACCTG GGTCTTCGCC
GTGATCCGCG ACATAACCAG CCAAAGGCAA GGTGAGGCGA AGATACTGGA GCTGAACCTT
GCCCTGAGAA ACCAGCTCGA GCAGTTGGGG GCAAGCAACA AGGAGCTGGA ATCGTTCAGC
TACTCGGTTT CCCACGACCT GCGGGCCCCG CTGCGCCACA TCATCGGGTT CGTGGACCTG
TTGAACGCCA AGGCCGGGAA CGTTCTGGAC GAGAAGAGCC GCCACTATCT GGAGGTAATC
AGCGAGGCGG CCAACAAGAT GGGGTTGCTG ATCGACGACC TGCTGGCCTT CTCGCGCATG
GGGCGCAGCG AAATGATGAA GGGGTGGGTA GACCTGGGAC TGCTGGTGAG AGAGATAGTG
AACGACCTGG AAAGCGATAG CAAAGAGAGG GAGATCCAAT GGGACATAGC CCCGCTCCCC
ATCGTGCTTG GGGATGCAGC AATGCTGCGC CAGGTTCTCA TCAACCTCAT CGGCAACGCG
GTCAAGTTCA CCCGGTCGCG GGAAGAAGCA AAAATCGCCA TTGGCGCCAT CGACCAGGAG
CAGGAAACGG AGATTTTTGT AAGGGACAAC GGGGTCGGGT TCGACGAGGC TTATGCGAGC
AAGCTTTTCG GCCTTTTCCA GCGTCTGCAT GCCAATGAGG AGTTCGAGGG AACCGGGGTC
GGGCTGGCTA TCGTGCAGCG GATCGTACTA CGACACGGCG GCAGGGTATG GGCTGAGGGC
GCGGTCGATG GCGGAGCAAC CTTCCGGTTC TCGCTCCCGA AGGGACTAAA CCCGGCGCCC
TAG
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| Protein sequence | MTDKDLTTDS GARKQEPGQL QGDLPFRLLV EQVKEYAVAL LDPQGNISSW NAGAEQITKY
RGSEVIGKHF SLLHPKEELR SGAPERELAI ARSLGSLDLQ GWRLKKDGSR FWAAITLTAL
YDQGENLAGF ALIAHDNTEK RASDEALVKS RNMLERLFET APDGIVVVDD NGVIRRTNQQ
AEITFGYMRE EMLGQRIELL VPERYHKHHR QHRRNYFADP RARKMGIGLE LYGRHKDGHE
IPVDIMLNPI ETPDGTWVFA VIRDITSQRQ GEAKILELNL ALRNQLEQLG ASNKELESFS
YSVSHDLRAP LRHIIGFVDL LNAKAGNVLD EKSRHYLEVI SEAANKMGLL IDDLLAFSRM
GRSEMMKGWV DLGLLVREIV NDLESDSKER EIQWDIAPLP IVLGDAAMLR QVLINLIGNA
VKFTRSREEA KIAIGAIDQE QETEIFVRDN GVGFDEAYAS KLFGLFQRLH ANEEFEGTGV
GLAIVQRIVL RHGGRVWAEG AVDGGATFRF SLPKGLNPAP
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