Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1077 |
Symbol | |
ID | 6781055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1249567 |
End bp | 1250889 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642767063 |
Product | O-antigen polymerase |
Protein accession | YP_002137893 |
Protein GI | 197117466 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.7973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGGGA TGTTGGCATT ACTTGCCTGT TTTGCCTTAG TCACTTGGCT CTTTGTTCGG GATCAGCGGG TGCGCCCGAT GCCCTCCCCC GAGTCGTGGC TACCCTTTGC GTGGTTCGTG ATCGTCGGGA CCAGACCGCT CTCCGCCTGG TTTTCGGTCC AGGAGGAGGA TTCCGCTGAC GCTTTCCTGG AGGGAAGTCC GCTGGACCGA TACTCTTTGA TGGCGTTGAT CCTGATCGCA TGCGTGGTCC TGCTGCGCAA GCGACCGCAA TGGTTTGGGG TCCTTCGTAG CAACTTCTGG TTCATGGCCT TCATCGCCTA CTGCGCTGTC AGCGTTGTCT GGTCCGATTA CCCCTTTGTC AGTTTCAAAA GATGGGTCCG GGAGCTCGGT AATGTAGTGA TGGTCCTGGT AATCCTCACC CAGGATGATG CAGGCAAGAC CACCCGTGCA TTGTTGGCAA GGTTCGCTTA TCTAGTCATC CCGCTTTCTG CGGTCCTGAT ACTCTACTTT CCCGCCCTCG GCACCTACTA CAGCGATCTT GAGGGTATCT CCTACTGTGG CGTTGCGACC TATAAGAACA TGCTCGGCAG CATCATGTTC ATCTCTGGGG TCTATCTCGC CTGGGAGTTA CTCTACGTGC CTGACGGGAA GGACACCAAG GTTTCAGATC TAGCCCCATT GGCCGCCCTA TGGGGGATGG CCGTGTGGCT CCTTGTTATC TCCAGCAGTT CTACCGCCCT TATCTGTCTG GCGATGGGGT CCGCTGTTCT GCTGCTGATG AAACTCACTT TAGCCCAGAG GCAGGTCCGC CATCTGGGGA CCTACACACT GCTTGGCGCC CTGCTCTTGT TGGGACTCTT CTCTCTCCAA GGAACGCTGG AGATAATGAC GGGGGCGGTG GGGCGGGATC TCACCTTCAC CGGTCGCACG GAGTTATGGG GGGACGTCCT TAGAGAACCT ATCAACCCCC TGCTTGGGAC TGGCTACCAG AGTTTCTGGC TCGGGGCACG CGCCGACGAC CTCTGGGAGC GTTATCTTTT CCACCCGCGG CAATCCCACA ACGGCTACCT GGAAACCTAC CTGAACGGCG GGTTGCTTGG CCTGCTCCTG CTACTCGCAC TCATCGCCTC GATAGGAAAG CGCTTGAAGA CTGGGCTCCT CGCCGGCAAC AGGTTCACCG TGCTCCTCTT TTCCTTCTGG GTCGCGTCGT TATTCTACAA TTTTACGGAA TCGCGGTTCG TAGGGCCAAA TCTGATCTGG ATCCTATTGA GCGTAGCCGC GTTATACCAC CCCGCCGAAG CAGACCTGCA ACAGGCGGGA TAG
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Protein sequence | MLGMLALLAC FALVTWLFVR DQRVRPMPSP ESWLPFAWFV IVGTRPLSAW FSVQEEDSAD AFLEGSPLDR YSLMALILIA CVVLLRKRPQ WFGVLRSNFW FMAFIAYCAV SVVWSDYPFV SFKRWVRELG NVVMVLVILT QDDAGKTTRA LLARFAYLVI PLSAVLILYF PALGTYYSDL EGISYCGVAT YKNMLGSIMF ISGVYLAWEL LYVPDGKDTK VSDLAPLAAL WGMAVWLLVI SSSSTALICL AMGSAVLLLM KLTLAQRQVR HLGTYTLLGA LLLLGLFSLQ GTLEIMTGAV GRDLTFTGRT ELWGDVLREP INPLLGTGYQ SFWLGARADD LWERYLFHPR QSHNGYLETY LNGGLLGLLL LLALIASIGK RLKTGLLAGN RFTVLLFSFW VASLFYNFTE SRFVGPNLIW ILLSVAALYH PAEADLQQAG
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