Gene Gbem_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1002 
Symbol 
ID6780975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1160086 
End bp1161108 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content64% 
IMG OID642766984 
Productpeptide chain release factor 2 
Protein accessionYP_002137819 
Protein GI197117392 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000036065 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGAAC TCGAGGAGCT GACCTCCCGC CCGGATTTCT GGAACGATGC GGAAAACGCC 
CAGAAGGTGC TCAGGTCCAG GACCGCGATG GAAAAGGACG TCACCACCTG GGAGAGCCTC
GACAAACAGG CGCGGGACAT AAAGGAGCTG ATCGAGCTGG GGAGCGAGGA GCAGGACGAG
GCGACCCTGG CCGAGGTAGC CGCCATGAAC GCGCAGCTGG AGACCGGGGT GTCCCAGGCG
GAATTCCGCA GGATGCTTTC CGGCCCCCAC GACGCCTCGG GGGCCTTCGT CTCCATCAAC
TCCGGGGCGG GGGGGACCGA GTCCCAGGAC TGGGCCGAGA TGTTGTTGCG GATGTACCTG
CGCTACTGCG AGAAGAAGGG GTGGAAGACC GAGATCACCG ATTACCAGGA AGGCGACGGC
GCCGGGGTAA AGGGGGTCAC CTTCGCGGTC ACCGGCGAAT TCGCCTACGG CTATTTGAAG
GCCGAGGCGG GAATCCACCG GCTGGTGCGC ATCTCCCCCT TCGACAGCTC CGCCCGGCGC
CACACCTCGT TCGCCTCGGC TTTCGTCTTC CCGGTAATCG AGGAGGAAGA CATCGAGATC
AAGATCGCCG AGAGCGACCT GCGCATCGAC ACCTACCGTT CCAGCGGCGC CGGCGGGCAG
CACGTCAACA CCACCGACTC CGCCATCAGG ATCACCCACA TCCCCACCGG GACCGTGGTC
GCCTGCCAGA GCGAGCGGAG CCAGCACATG AACAAGGCCA CCGCCATGAA GGTGCTGCGC
TCGAAGCTCT ACGAGATGGA GCTGCGCGAG CGGGAAGCAA AGGCGTCGGA CATAGCGGGT
GAGAAGAAGG AAATCGGCTG GGGGAGCCAG ATCCGCTCCT ACGTGCTGCA CCCGTACAAG
ATGGTGAAGG ACCTGCGCAC CGGTGTGGAG AGCGGCAACC CGGACGCCGT CCTCGACGGT
TCCCTCGACG ACTTCGTGGT CCCGTACCTT ATGGGAGTGC GCCGGGAGAC CAAGGATATT
TAG
 
Protein sequence
MQELEELTSR PDFWNDAENA QKVLRSRTAM EKDVTTWESL DKQARDIKEL IELGSEEQDE 
ATLAEVAAMN AQLETGVSQA EFRRMLSGPH DASGAFVSIN SGAGGTESQD WAEMLLRMYL
RYCEKKGWKT EITDYQEGDG AGVKGVTFAV TGEFAYGYLK AEAGIHRLVR ISPFDSSARR
HTSFASAFVF PVIEEEDIEI KIAESDLRID TYRSSGAGGQ HVNTTDSAIR ITHIPTGTVV
ACQSERSQHM NKATAMKVLR SKLYEMELRE REAKASDIAG EKKEIGWGSQ IRSYVLHPYK
MVKDLRTGVE SGNPDAVLDG SLDDFVVPYL MGVRRETKDI