Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0985 |
Symbol | |
ID | 6780958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1143227 |
End bp | 1144006 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642766967 |
Product | ABC transporter related protein |
Protein accession | YP_002137802 |
Protein GI | 197117375 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.419565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCG CTAACCAACC GCTTCTAAGC CTCAAAGGGA TCACCAAGCG CTTCGGCGCG CTGACCGCGG TAAACGGCGT CGACCTCGAC GTCTGCCCGG GGGAAATCGT GGTCATCATA GGGCCATCCG GATCGGGAAA GTCGACGCTT TTGCGCTCGG TGAACTTCCT GGAGGAGATC GAGGAAGGGA CCATAACCTT CGAAGGGAAC GAGATCGGCT ACGTGAAGAG CAAGCACGGC CGGCGCCATC TGGACGCTCC CGCGAAGATC TGCGAGCTTC GCTCCGAGAT CGGCATGGTG TTCCAGCACT TCAACCTCTT TCCGCACATG ACCGTGCTCG GCAACGTGAT GGAGGGGCCG CTCACCGTGC AGAAGAAGTC CCCCGAAGCT GCCCGCGAGA TTGCGCTGGA CATGTTGGCT AAGGTGGGGC TTTCCGACAA GCGCGACGTC TACCCGGCGA CCCTGTCGGG TGGGCAGAAG CAGCGCGTCG CCATAGCTCG GGCGCTGGCC ATGCGGCCAA AGCTGATGCT TTTCGACGAG CCCACTTCCG CCCTCGACCC CGAGCTGATC GGCGAGGTGT TCGACACCAT CCGGTCGTTG GGCAAGGAGG GGATGACCAT GATCATCGTC ACCCATCAGA TGGGGTTCGC CAAGGAGATG GCGGACCGGG TCATCTTCAT GGAGAAGGGA TCCTTCGTCG CCCAGGGAAC CCCCGAAGAC TTCTTCAGCA ACCAGATGGA GCACGAAAGA ATTCAGTCCT TTCTCAACCG TATCATGTGA
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Protein sequence | MKTANQPLLS LKGITKRFGA LTAVNGVDLD VCPGEIVVII GPSGSGKSTL LRSVNFLEEI EEGTITFEGN EIGYVKSKHG RRHLDAPAKI CELRSEIGMV FQHFNLFPHM TVLGNVMEGP LTVQKKSPEA AREIALDMLA KVGLSDKRDV YPATLSGGQK QRVAIARALA MRPKLMLFDE PTSALDPELI GEVFDTIRSL GKEGMTMIIV THQMGFAKEM ADRVIFMEKG SFVAQGTPED FFSNQMEHER IQSFLNRIM
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