| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0968 |
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| Symbol | |
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| ID | 6780936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1119508 |
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| End bp | 1121109 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642766945 |
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| Product | phosphodiesterase |
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| Protein accession | YP_002137785 |
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| Protein GI | 197117358 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00053282 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTATTG ACATTACGAT AACCATAATC CTCGTGCTCG TGGCGGCCGG TATCGGTTAC
GCGATAGGGA ACGTGCTGCG CAAAAAACTC TCCAACTCCC TGGTGACCGA CGCCGAGACG
CTGGCCGCCA AGATGATCGA GGACGCCAAG CGGCAGACTG AAGTTATGGC CATGGAGGCC
GCCGTTCAGG CAAAAGACGC GGTGTACCAG GCAAAAGAAG AGCTGGAGAA ACAGTTCGAA
CAGGAAACAC GCGAAAAACG CCGGGATCTT CAGGCTCTGG AGAAGAGGCT GCAGCAAAAA
GAAGAAAATC TCGACAAGAA GACCAACCTT TTTGACCAGC GTGACGCGGA TTTCCTGAAA
CGGGAGCAGG CGCTGGCCGT TCGCGAGCAG TCCCTGGTTA CCAAAGAGCA GACGCTCGGG
CAGAAGGAGG AAAAGCTCGA CGCACTGGTC GGCGAGCAGA AGGCGAAGCT GGAGCAGATC
GCCGGCATGA CCTCCGCCGA AGCGAAGAAG TTCCTCATGG ACTCAATGGA GGACGAGGCA
AAACTCGACG TCGCCAAGCT GATCAAGGCG ATGGAAGAAG AAGCAAGAGA GACCGCGGAT
AAGAAGGCGA AGGAGATTCT GGCCCTCGCC ATGCAGCGCT ACGCTGGCGA GTACGTCGCC
GAGCGGAGCG TCTCCGTCGT GACCCTTCCC TCCGACGAGA TGAAGGGGCG CATCATCGGC
CGCGAAGGAC GCAACATCAG AGCCCTTGAG GCTGCCACCG GCATCGACCT TATCATCGAC
GATACCCCTG AAGCGGTCAT CCTTTCCGGG TTCAATCCGG TAAGAAGGGA AGTCGCCAAG
CTGTCGCTGC AGAAACTGAT CGCCGACGGC AGGATCCATC CGGGGCGCAT CGAAGAGGTC
GTTGCCAAGT CTCAGGAGGA AATAGAGCAG GCGATGAAGG AAGCCGGCGA GCAGGCTGCC
TTCGACCTGG GCGTGCACGG CATTCACCCC GAGATCCTCA AGCTGATCGG CAGGCTCAAA
TACCGCACCT CCTACAGCCA GAACGTCTAC CAGCACTCGC TGGAAGTAGC CTTCCTCTGC
GGCATCATGG CCGCCGAACT CGGCATCAAC GTGAAGCAGG CCAAGAGGGC CGGCCTTCTG
CACGACCTCG GCAAGGCCGT CGACCACGAG ATCGAAGGCT CCCACGCCGT CATCGGCGCC
GACATCGCCA AAAAGTACGG CGAGTCCCCG AAGATCGTGC ACGCCATCAT GGCGCACCAC
GAGGACGAGA AGCCGGCGAC GGTGCTCGCC GTCCTGGTGC AGGCAGCGGA CGCGCTCTCC
GGAGCCCGCC CCGGCGCCCG CCGCGAAATG ATGGAGACCT ACGTGAAGCG TCTGGACGAC
CTGGAGAGGA TCGCCACCTC GTTCGACGGC GTCCTGACCT CCTTCGCCAT CCAGGCAGGC
CGCGAGATCC GCGTCATGGT TTCCAGCGAG CAGGTGACCG ACGACCGTGC GCTGGTCTTG
GCCAAGGACA TCGCCAAGAA AATCGAGACC GAGATGACCT ACCCGGGACA GATCAAGGTG
AACGTGATCA GGGAAACCAG GGCCACCGAA TATGCCCGTT AA
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| Protein sequence | MSIDITITII LVLVAAGIGY AIGNVLRKKL SNSLVTDAET LAAKMIEDAK RQTEVMAMEA
AVQAKDAVYQ AKEELEKQFE QETREKRRDL QALEKRLQQK EENLDKKTNL FDQRDADFLK
REQALAVREQ SLVTKEQTLG QKEEKLDALV GEQKAKLEQI AGMTSAEAKK FLMDSMEDEA
KLDVAKLIKA MEEEARETAD KKAKEILALA MQRYAGEYVA ERSVSVVTLP SDEMKGRIIG
REGRNIRALE AATGIDLIID DTPEAVILSG FNPVRREVAK LSLQKLIADG RIHPGRIEEV
VAKSQEEIEQ AMKEAGEQAA FDLGVHGIHP EILKLIGRLK YRTSYSQNVY QHSLEVAFLC
GIMAAELGIN VKQAKRAGLL HDLGKAVDHE IEGSHAVIGA DIAKKYGESP KIVHAIMAHH
EDEKPATVLA VLVQAADALS GARPGARREM METYVKRLDD LERIATSFDG VLTSFAIQAG
REIRVMVSSE QVTDDRALVL AKDIAKKIET EMTYPGQIKV NVIRETRATE YAR
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