Gene Gbem_0808 details

Gene Information

• Locus tag: Gbem_0808
• ID: 6783646
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 957817
• End bp: 958512
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642766782
• Product: uracil-DNA glycosylase
• Protein accession: YP_002137627
• Protein GI: 197117200
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0692] Uracil DNA glycosylase
• TIGRFAM ID: [TIGR00628] uracil-DNA glycosylase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACGG AAAGACAGAT TCAACTGGAA GCTGGCTGGA AATCGCACTT GCTGGAGGAG 
TTCCAGAAGC TTTACATGTC TGAGTTGAAG GAGTTCCTGC GCCTTGAGAT AGCGCGCAAG 
AAGACCATCT ATCCCAAGGG GAGCGAGTAC TTCAACGCCT TCAACTCCAC CTCCTTTGAT 
AAAGTGAAGG TGGTGGTGCT CGGGCAAGAT CCCTACCACG GGCCGGGCCA AGCCCACGGG 
CTTAGCTTCT CCGTTCCGCG CGGGGTAGAT ATTCCGCCTT CGCTGGTGAA CATCTTCAAG 
GAGATCCAGA CGGATCTCGG GCTTACGCAG GAGGACTTCA GGCACGGCTA CCTGAAGTCC 
TGGGCGGACC AGGGCGTTCT TCTCTTGAAC AGCGTGCTGA CGGTCGAGGC TGGACGCGCC 
GCTTCCCATC AGGCGAAGGG GTGGGAAATC TTCACCGACC GCGCCGTCTC AATGCTCAAC 
GAGAAGAAGG ATCACCTCGT TTTCATGCTT TGGGGAGCCT ACGCCCAGAG AAAAGGGGGC 
GTAATCGACG AGAAGAGGCA CCTGGTACTG AGGGCGCCGC ATCCGTCGCC CCTGTCCGCT 
CACCGCGGTT TCCTCGGTTG CCGGCACTTC TCCCAGGCCA ACGCCTACCT GGCACGGCAC 
GGAAGGGATC CTATAGATTG GCGTCTCCCC GACTAG 

 

Protein sequence

MTTERQIQLE AGWKSHLLEE FQKLYMSELK EFLRLEIARK KTIYPKGSEY FNAFNSTSFD 
KVKVVVLGQD PYHGPGQAHG LSFSVPRGVD IPPSLVNIFK EIQTDLGLTQ EDFRHGYLKS 
WADQGVLLLN SVLTVEAGRA ASHQAKGWEI FTDRAVSMLN EKKDHLVFML WGAYAQRKGG 
VIDEKRHLVL RAPHPSPLSA HRGFLGCRHF SQANAYLARH GRDPIDWRLP D