| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0760 |
|---|
| Symbol | |
|---|
| ID | 6783593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 893781 |
|---|
| End bp | 895559 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642766731 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002137582 |
|---|
| Protein GI | 197117155 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.554801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TGGAAAAGCT GTTGGTCGGC GCTGCCGTTT GCGCACTGGC CGTACCTGCG
CTGGCGCAGG CGGACGAGCA GGACATGCAG AGGAAAATTG AGGAGCTCAC CAAGAAAGTG
CAGAAACTTG AGGAGCAGAA GGGGGGCGCA GACCAGAAGA AGATCGAGGA TCTGACCCGC
AAGGTAGACA AGATCGAGGA AAAATCCCTC GGCAAGTGGC TCACCATTGG CGGCGACTAC
CGCTTCAGGC TGGACAGCCT GAACGGCAGC ACCAAGGCAT ACACCGATGC CTTCGGCTCC
CTCAATAACG CGCAGAATGC CCTTCAGGGC ACCATCTTCG GCGGCGGTTC CGTAGCCGGA
CAGCCGGTGT CGCAACTGAT GCCTCTAGTG CAAACCATGC AGCACACCAC CTCTTATGCC
GCTGCGGCAG GGATGGTGCG GGGCCTGATG AGCCCACTTC CCCCAGGCAC TCCCGCAAAC
ATCGTGCTCC AGCAGCAGCT GGCGGGCATG CTGATGACGC CGGCCGCCGC CGGCGGCTAT
GCAATCCAGG TCCCAGCGTA CAAGCCGAAC AACGACACCC TCTACACCAA CAGGTTCGGC
CTGAATATAC ATGCTAAGGC GACCAAGGAC GTGACCGTAA ACGTCCGACT GCTGGCATAC
AAAACCTTCG GGTCCAACGA CGACCAGGCA GTCACCAACG GCGGCGCCAC TCCGTTCTTC
GCTGACCGCG TCGGCGTATT CGATGGCACC CTCGGGCGCG TTCCTTCCAG CGACTTCCTG
AACGTAGACC GCGCTTATGC GACCTGGTCC AACATCGCCG AGCAGCCGAT CTGGTTCTCG
ATAGGCCGTC GCCCCTCCAC CGAGGGTGCG CCGTCTAACC TCCGTCTGAA CAACGAGCGC
CCGGGCAACG GCGGCACCCC CGCCCTTCTC GTCGATTACG CCTTCGACGG CATGACCCTC
GGCTGGGCTC CCGACATCGA GGCCCTTCCC GGCGCCTACG CCAAGATCTG CTACGGCCGC
GGCTTCGAGG CTGGCTTCGA AACCCCCGCC AACAACCTGA AAGACACCGA CATGCTGGGG
CTCGCCATCG TCCCGGTCGA CACCGATCCG CTGCGCGTCT GGCTGCAGTA CAACCGCGGC
TTCAACATCT TCGACTTCCC GACCATGAAC GACACCTACT TCGGCAATAC CGCTCCTGCG
GTCAACCTGG GCGCGATCGA CTGGTACGGC CTCGGCGCCA TGAGCACGAT TAAGAAAGTC
GGCCCGGGCA ACATCAACTT CTTCGGGGAT GTCGGGATGA GCGTCACCCA TCCGAACAAC
AGCGTTTCCG GCAACGCCGG GTTCGAGGGC TTGATGACCG GCGCCTTCTT CAACCCGGAA
GCTCCTACCA GCAAAACCGG CTGGGCCACC TACGTCGGCG CGCGTTACGA CTACGAACCG
ACCAAAACTA AATTCGGCGT TGAGTACAAC CACGGCTCCA AGAACTGGAT CACCTTCGCA
CCTGCTGCTG ACGACATGTG GACCGCCAAA GTCGGCACCC GCGGCGACGT CTACGAAACT
TACCTGATCC AGGAGCTTAA CAGCAAGCCG GTCTCCTCTT TCATCTCCAA GGCCTTCTTC
CGCATCGGCT TCCAGTACTA CGACTTCGAA TACACCGGAA GCAACAACTG GGTTGGCGCT
CCGGTGAAGA TCTCCAGCAT CCAGCCGGGC GACATGATGT TGATGGCGCC GGTTAAGAGC
GCCCGCGACA TCTACGCAAC CCTCGAAGTT AAATTCTAA
|
|---|
| Protein sequence | MKKLEKLLVG AAVCALAVPA LAQADEQDMQ RKIEELTKKV QKLEEQKGGA DQKKIEDLTR
KVDKIEEKSL GKWLTIGGDY RFRLDSLNGS TKAYTDAFGS LNNAQNALQG TIFGGGSVAG
QPVSQLMPLV QTMQHTTSYA AAAGMVRGLM SPLPPGTPAN IVLQQQLAGM LMTPAAAGGY
AIQVPAYKPN NDTLYTNRFG LNIHAKATKD VTVNVRLLAY KTFGSNDDQA VTNGGATPFF
ADRVGVFDGT LGRVPSSDFL NVDRAYATWS NIAEQPIWFS IGRRPSTEGA PSNLRLNNER
PGNGGTPALL VDYAFDGMTL GWAPDIEALP GAYAKICYGR GFEAGFETPA NNLKDTDMLG
LAIVPVDTDP LRVWLQYNRG FNIFDFPTMN DTYFGNTAPA VNLGAIDWYG LGAMSTIKKV
GPGNINFFGD VGMSVTHPNN SVSGNAGFEG LMTGAFFNPE APTSKTGWAT YVGARYDYEP
TKTKFGVEYN HGSKNWITFA PAADDMWTAK VGTRGDVYET YLIQELNSKP VSSFISKAFF
RIGFQYYDFE YTGSNNWVGA PVKISSIQPG DMMLMAPVKS ARDIYATLEV KF
|
|---|
| |