Gene Gbem_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0543 
Symbol 
ID6783372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp656156 
End bp657301 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content62% 
IMG OID642766513 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002137368 
Protein GI197116941 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCGA TCTTCAACGA GGAGCAGAGG AACTTCAAGC AGATGGCGAT CGAGTTCGCC 
CGGCGCGAAC TGAACCAGGG CGCCAAGGAA CGCGAGAGAA AAGGCGAGTT CTCCCAGCGC
GGTTGGGAAA AATGCGCCGA GTTCGGCATC CCGGGCATCA CCATGCCCGA GAAGTACGGA
GGGCTCGGGC TCGACACCAT GACCTCCATC GCCACCATGG AGGGGCTCGG CTACGCCTGC
CTCGACAGCG GCCTGCTTTT CTCCCTGAAC TCCCATGTCT GGACCTGCGA GTCCCCCATC
AACCGTTTCG GCAGCGAGGA GCAAAAAAAG CGCTATCTCC CCGGGCTCAT CGCCGGCAGC
CTCCGAGGCG GGCACGCCAT GACGGAGCCC GATGCCGGCT CCGACGCCTT CAGCATGAGG
TGCCGGGCGG AAAAGCGGGG GGACAGGTAC ATCCTGAACG GCTCCAAGAC CTTCATCACC
AACGCCCCCA TCGCCGACCT GTTGCTGGTG TTCGCTGTGA CCTGCAAGGA AAAGGGGTTC
GCCGGGGTTT CCGCCTTCAT CGTGGAAAGA GGGTTTCCCG GGTTTTCCAC GGGGCAACCG
CTGGAAACCA TGGGCCTTAG GACCTGCCCT TTGGGCGAAG TGTTCCTGGA GGAGTGCGAG
GTTCCCGAGG AGAACCGTCT GGGGCAGGAA GGAAGCGGCG CCGCGATCTT CAACTCCGAG
ATGGAATGGG AGCGGAGCTG CCTTTTCGCC GCGCACCTGG GGGCGATGGA CAAGATCCTG
GAGGATTGCG TGGCCTACGC CAAGGAGCGG CAGCAGTTCG GCAAGGCGAT AGGCAAATGC
CAGTCCATCT CGCACAAGAT CTCCGACATG AAGGTCCGCA TCGAACTCTC CCGGCTGATG
CTGCACCAAG TGGCGACGCT CAAGGGACAG GGGAAACGGG CGCCGCTGGA ATCGGCGATG
GCGAAGCTCT TCATCAGCGA AAGCTACGTG CAAAACTGCA CCGATGCGCT GCAAATCCAT
GGGGCCTACG GCTACAGCGC GGAGTACGAC TTCGAGCGGA ACCTCCGTGA CGCCATCGCC
GGGAAGATCT ACTCCGGCAC CTCCGAGATC CAGCGCAACA TCATCGCCAC CTTCCTGGGG
CTCTAG
 
Protein sequence
MEAIFNEEQR NFKQMAIEFA RRELNQGAKE RERKGEFSQR GWEKCAEFGI PGITMPEKYG 
GLGLDTMTSI ATMEGLGYAC LDSGLLFSLN SHVWTCESPI NRFGSEEQKK RYLPGLIAGS
LRGGHAMTEP DAGSDAFSMR CRAEKRGDRY ILNGSKTFIT NAPIADLLLV FAVTCKEKGF
AGVSAFIVER GFPGFSTGQP LETMGLRTCP LGEVFLEECE VPEENRLGQE GSGAAIFNSE
MEWERSCLFA AHLGAMDKIL EDCVAYAKER QQFGKAIGKC QSISHKISDM KVRIELSRLM
LHQVATLKGQ GKRAPLESAM AKLFISESYV QNCTDALQIH GAYGYSAEYD FERNLRDAIA
GKIYSGTSEI QRNIIATFLG L