Gene Gbem_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0530 
Symbol 
ID6783359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp639359 
End bp639988 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content60% 
IMG OID642766500 
Productprotein of unknown function DUF922 
Protein accessionYP_002137355 
Protein GI197116928 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5661] Predicted secreted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0183293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCGGC GCGTTACCAC CCTTGCGGGC CTTATGGCTA TCCTTATCCT TTGCGCCTCC 
CCTCTCTTTG CCGGGACCAG GAGCGCTCCT TCCTGCGAGC TGACCGCCAA GGAACGTTAC 
ACCTACTACG AGATAAGCGG CAAAGATGTC GATGACCTGC GCAGGGAGAT GAACCAGAGA 
GGTACCGTTG GCGAGGACGG CCGGGTCTAT TCCGCCCTTA CCAGCTGGGA CATCAACTTC 
TCTTATGACA TAGCGCAGGA CGCGAGCGGC TACCGGGTCA AGTCGGCGAC TACCAACGTC 
GATATCGAGT ATCGCCTTCC GCGTGTCGGC GCCAGTTGCA CCGACCCGGA GCTGAACCTG 
GTGTGGGCGC GCTACTCGGA GCGCCTGCAA CAGCATGAGT TCGGCCACAA GAATCTGGCC 
ATCCAGGCTG CTTCGGAGAT AAACGAACTG CTGGCGTCGT TGCCTGCGTT CCCTACTGCA 
GATGCACTGG CTGCCGAGAT CACACGGGTC ACGGACGAGA AATTCCGGGT GCTGAAAGAG 
AAGCAGGTGG GATACGACGA CGAAACACGG CATGGCGAGA CGCAAGGGGC CATCCTCCCC 
AGCCGTGGCA CTCGCTTCGC CGGTGCATAA
 
Protein sequence
MFRRVTTLAG LMAILILCAS PLFAGTRSAP SCELTAKERY TYYEISGKDV DDLRREMNQR 
GTVGEDGRVY SALTSWDINF SYDIAQDASG YRVKSATTNV DIEYRLPRVG ASCTDPELNL 
VWARYSERLQ QHEFGHKNLA IQAASEINEL LASLPAFPTA DALAAEITRV TDEKFRVLKE 
KQVGYDDETR HGETQGAILP SRGTRFAGA