| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0368 |
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| Symbol | |
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| ID | 6783194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 445783 |
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| End bp | 447699 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642766337 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002137195 |
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| Protein GI | 197116768 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAGTC ACGGCAACTA TAAATTAGAG GCGGATCGCA AGGAAGGGAT GGACGACTCC
GGCCTCGAGA TCGCGGCCCT GCTGATGAAG TCGGGTTACC TCGCGGACAC CCAGCTCAGT
TACGCGCAGC GGGTCAAGGC AAAACTCCTC TCCCCGAGAA CGCTGGTCGG CGTGCTGCTG
GAGCTCGGCT TCTTCACCCG GGAGCAGCTC AGGGAGACGC TCCGGAGCAA CATGGTATCG
GTGAAGCTCG GGGCCCTGCT GGTGGAACTC GGCTACCTGA AACCGGGAGA GTTGCAGGCC
GCCCTCGGGA TACAGCGGGA CGGGGAAAAC TGCAAGATGC TGGGCGAGAT CCTGGTGGAA
CAGCGCTTTA TCGAGGAGTA CACCCTGGCG GAGGTGCTCG CCTTCCAACT GGGGTTCCCT
TTCATCGACC TGGACGCCTC CAGCATCGAC CGGGCGCTTT TGGGCCGGGT CCCCCAGCAC
TGGCTGGCGC AGCACAGCTT CGTTCCCGTC AAGGAGGAGG AGGGGAAGGT CCTGGTGGCG
ATCGCGGACC CCCTGAACCT GGAGGGGAGA AAGACGGCGG AGAAGCTGTT CGGCCAGAAC
ACCACCTCCT TCGCCATCTG CACCATGAAG GCGATCCGGG ACGCGCTCAG CCTCTTGAAG
CGGGGGATGG TGCAGGGGGA CGGCACGGCG ACCGACGAGC ACACGGTGAC CGGCATTGTG
AATTCCATCT TCGAAGAGGC CCTGAAGGAG GGGGCAAGCG ACATACATAT CGAGCCGATG
CGCAGCGCGC TCAGGGTGCG CTTCAGGCGG GACGGGATGC TGGTCCTATA CAAGGACTTC
GCCAGGGAGC TGGCGCTTCC CATCAGCAGC AGGATCAAGG TTATGGCCGA GGCGGACATC
GCCGAGAGGA GGAGGCACCA GGACGGCCGG ATCTGCTACG AAAGCGCAAA GAGCGGCAAC
ACTCTGGACA TGAGGGTCTC CTTCTACATC ACCATCCACG GAGAGAAGAT CGTGCTCCGC
CTTCTGAGTA TGAAAGCGGA ACTCCTCGAT CTCAAGGAGA TCGGCATGTC CGGGCGCATG
CTGGAGCGCT TCATCGACGA CGCGCTGGAT ACGCCAAGCG GCGTCCTGAT CGTCACCGGG
CCTACCGGCA GCGGCAAGAC CTCCACGCTG TACAGTTGCG TGCACCACCT AAACGACCTG
AACACCTCCA TCGTCACCGC CGAGGAACCG GTTGAATACG TGATTGAGGG GATCGCCCAG
TGCTCCATCA ATCAGAAGAT CGGGGTGACC TTCGAGGAAA CCCTCAGGCA CATCGTGCGC
CAGGACCCCG ACGTGATCGT CCTGGGAGAA ATCCGGGACA GCTTCTCCGC CGAAACCGCG
ATCCAGGCGG CGCTCACCGG GCACAAGGTC CTCACCACCT TTCACACCGA GGACAGCGTC
GGGGGGCTCC TGCGCCTGAT GAACATGAAC ATCGAGGCAT TCCTGATCGC CTCCACCGTG
GTCTGCGTCC TGGCGCAGCG GCTTTTGCGC CGCATCTGTC CTGAGTGCAG CGAGAGCTAC
CTTCCCACGC CGACCGAGCT CCGGCGGATA GGCTACAGCA ACGCCGACCT GCGGGGGGCC
GAGTTCAGGA TCGGACGGGG GTGCGCCAAA TGCAGGTACA GCGGGTACCG CGGCAGGGTT
GGCGTATTCG AGATGCTGAT ACTGAACGAA CTGGTGAAGG ACGCCATCCT CAGCAAGAAG
ACCTCCTACG AGATCAGGAA GATCTCCACG GAGAGCACCG GAATGGTCAC GCTCCTGGAG
TCGGGGCTTT GCAAGGCAGC CGCGGGGCTG GTGTCGCTGC ACGACACGGT GCGGCTCCTC
CCCAGGATCG GCAAACCGCG CCCGATTTCC GAGATCAGGC GCCTTTTGGG GGATTGA
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| Protein sequence | MESHGNYKLE ADRKEGMDDS GLEIAALLMK SGYLADTQLS YAQRVKAKLL SPRTLVGVLL
ELGFFTREQL RETLRSNMVS VKLGALLVEL GYLKPGELQA ALGIQRDGEN CKMLGEILVE
QRFIEEYTLA EVLAFQLGFP FIDLDASSID RALLGRVPQH WLAQHSFVPV KEEEGKVLVA
IADPLNLEGR KTAEKLFGQN TTSFAICTMK AIRDALSLLK RGMVQGDGTA TDEHTVTGIV
NSIFEEALKE GASDIHIEPM RSALRVRFRR DGMLVLYKDF ARELALPISS RIKVMAEADI
AERRRHQDGR ICYESAKSGN TLDMRVSFYI TIHGEKIVLR LLSMKAELLD LKEIGMSGRM
LERFIDDALD TPSGVLIVTG PTGSGKTSTL YSCVHHLNDL NTSIVTAEEP VEYVIEGIAQ
CSINQKIGVT FEETLRHIVR QDPDVIVLGE IRDSFSAETA IQAALTGHKV LTTFHTEDSV
GGLLRLMNMN IEAFLIASTV VCVLAQRLLR RICPECSESY LPTPTELRRI GYSNADLRGA
EFRIGRGCAK CRYSGYRGRV GVFEMLILNE LVKDAILSKK TSYEIRKIST ESTGMVTLLE
SGLCKAAAGL VSLHDTVRLL PRIGKPRPIS EIRRLLGD
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