| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0343 |
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| Symbol | |
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| ID | 6783169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 418508 |
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| End bp | 420307 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642766312 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_002137170 |
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| Protein GI | 197116743 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCTG AAACATTCCA ATTCAACGAC ATAGACCGGC AGTTCGCCTC ATTCATCTGC
CGGCAGGCGG CAAGCCGCGA CGCGCACCTT GAGGCTGCGG CGGCGCTCTT GAGCCGCGGG
GTGACGGCGG GGGACGTCTG CCTCGACCTG GAGAGCGCCC TGGAAGACGC GCGCGCCGCT
GGGTACCGCA TCGAATCGGT AGCCGCCTGG CGCCAGAAGC TCGCCGCCCA CCCGGTAGTC
GGCGAGCCCG GCGAGTTCAA GCCGCTCATC CTGGACCACG CCGACCGCCT CTACCTGCAG
CGCTACTGGC GCTATGAGGA TGAGCTCGCC GAGGCGATCA TGAAACGCGG CAAGACGGTG
CGGTTCGACC GGGCGCTGTT GCAGAAGGGG CTCGCACGGC TTTTTCCTCC CACGCCTGGA
GAAACGGACT GGCAGCGGGT TGCTGCCCTC GCCGCCGTCA CCAGGCGCTT TTGCGTCATC
TCCGGGGGGC CCGGAACCGG CAAGACCTCG ACCGTAGTAA AGGTGCTATC GCTCCTCCTG
GAGCAGGCGG AGGAGGCTGG AACCGGCGCC GGCCTCAGGA TCGCACTGGC TGCCCCCACC
GGCAAGGCTG CCGCGAGGCT TAAGGAATCG ATCAGCGATG GAGCCCGCTT TGCCGAAGAG
GGGGTACGCG GGCTGATCCC GGAGGACGTC TTCACCCTGC ACCGCCTGCT CGGTTACCTG
AAGGGTTCCA GCGGCTTCCG CCACAACGCC GATAACCCGC TCCCCTACGA CGTGGTAATC
GTCGACGAGG CCTCCATGGT CTCGCTCCCC CTCATGGCCA AGCTGGTCTG CGCCTTGCGG
CACGACACCC GCCTGATCCT TTTGGGCGAC CGGGACCAGC TCGCCTCGGT GGAAGCCGGC
GCGGTCCTGG GCGACATCTG CGACACCGGC GGCGTGCACG GCTTCTCCCC CGCTTTCGCC
GCCCTGGCAG CCGACCTCGC CGGCGATGCC GTCACCTCCA GCTCCGGCAT GTCCCCGCTC
GGCGACGCTG TCGTGCAGTT GCAGAGGAGC TACCGCTTCT CCTCCGCCGG AGGCATCGGC
AAAGTTGGTT CGCTGGTCAA CGCAGGGGAT GCTCCCGGCG CTTTGTCGGC CTGCCTCGAC
TCCGCCGTAG CCGGCGTCAC GCTGGCGCCG CTCCCCACCG CAGCCGCCCT GGCCGACGCG
CTCGCCAAAA GGATTAGCGA AGGCTACGGC GCCTATCTGC GGGAGGAGAG CCCGGAAGCA
GCCTTCGCTG AGTTCAGCCG GTTCCGTATC CTTTGCGCCA TGCGCAGCGG CCCGTTCGGA
GTCGAGGCGA TCAACCTCCT GGTGCGTCAA CGATTGTCCC AGGCGGGAAT GATCCACCCC
CGCGGCCGCT GGTACGCCGG CGAGCCGGTC ATGATCACCA GGAACGACTA CAACCTTGGG
CTCTTCAACG GCGACGTGGG GCTGATTTTG CCCGACGCCG AAACCGGAGG AGAGCTGCGC
GCCTTCTTCC CCTCCGGCAC CGGCGGCATG AGGAAAGTCT TGCCGCTCAG GCTCCCGGAA
TACGAGTGCG CCTTCGCCAT GACCGTGCAC AAGAGCCAGG GTTCCGAGTT CGACCGAGTG
CTGCTGGTTC TGCCCGACCG CGACGCGCCG GTCCTGACAC GGGAGCTTTT GTACACCGCC
ATAACCCGGG CGAAAACGTC GGTCGACATC CTGGCGAACC AGGAACTTTT TCTCTCCACC
GTCACGCGCA GAATTGTCAG ACGGTCGGGA CTGAGAGACA AAACGTGGAA ACCCAATTGA
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| Protein sequence | MAAETFQFND IDRQFASFIC RQAASRDAHL EAAAALLSRG VTAGDVCLDL ESALEDARAA
GYRIESVAAW RQKLAAHPVV GEPGEFKPLI LDHADRLYLQ RYWRYEDELA EAIMKRGKTV
RFDRALLQKG LARLFPPTPG ETDWQRVAAL AAVTRRFCVI SGGPGTGKTS TVVKVLSLLL
EQAEEAGTGA GLRIALAAPT GKAAARLKES ISDGARFAEE GVRGLIPEDV FTLHRLLGYL
KGSSGFRHNA DNPLPYDVVI VDEASMVSLP LMAKLVCALR HDTRLILLGD RDQLASVEAG
AVLGDICDTG GVHGFSPAFA ALAADLAGDA VTSSSGMSPL GDAVVQLQRS YRFSSAGGIG
KVGSLVNAGD APGALSACLD SAVAGVTLAP LPTAAALADA LAKRISEGYG AYLREESPEA
AFAEFSRFRI LCAMRSGPFG VEAINLLVRQ RLSQAGMIHP RGRWYAGEPV MITRNDYNLG
LFNGDVGLIL PDAETGGELR AFFPSGTGGM RKVLPLRLPE YECAFAMTVH KSQGSEFDRV
LLVLPDRDAP VLTRELLYTA ITRAKTSVDI LANQELFLST VTRRIVRRSG LRDKTWKPN
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