Gene Gbem_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0339 
Symbol 
ID6783165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp414470 
End bp415606 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content51% 
IMG OID642766308 
ProductIntegrase catalytic region 
Protein accessionYP_002137166 
Protein GI197116739 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTGGC GACCGGTGGA TACTATGACC CTGAGATTCG AGTTCGTTCA TTTGGCGTTG 
CAGGAAGGCA GCAACATAGC CTTCCTTTGC AAACGCTTTA ACATCAGCCG TCCGACCGGC
TACAAATGGA TTAGCAGGTT CCTTGAAACC GGCGTCGAAG GCCTAATTGA CTTATCTCGC
AAGCCACTGA CCTGTCCACA TAAGACGGTC ACTGCGACCG AAGATGCTAT TCTCAAGCTT
CGCGAAGAAC ATCAGGCTTG GGGAGCACGT AAGCTACGTA AGCGTCTTGA AAAACTTGGG
CATCAGGGGG TGCCTGTACC TTCGACCATA ACAGCAATCT TGCGCCGCAA CGGCTGCATT
GATCCAGCTG AGTCAGATAA ACATACTGCT TTCCAACGGT TCGAGCACCC ATACCCAAAC
GACCTATGGC AGATGGATTT CAAGGGCAGT ATTCCGATGA AGCATCATGG TCGCTGTCAT
CCGTTGACTG TTCTGGATGA CCATTCCCGG TTTAGTGTGG TGCTTGTAGC CTGTGCCAAT
GAGCGAACAG AAACGGTTAA AGCTGCTTTG ATTGAGGCAT TCAGGCAATA TGGATTGCCA
TATCGAATGA CCATGGACAA TGGCAGCCCA TGGGGTAACG ATCAATACAA CGACCTTACG
CCATTAACGG TCTGGCTTAT CAGAAACGAG ATACGGGTCA GCCACTCTCG CCCCTATCAT
CCTCAAACAC AGGGTAAGGA CGAGCGGTTT CACAGAACTC TGGTTGCAGA AGCAATCGCT
GGAAGAGTCT TCGAAGACCT AGCTGACTGC CAGCTTAGAT TCGACACCTT CAGGCATTGC
TACAACTTGG AGCGCCCACA CGAATCACTA GGTATGGAAA CTCCGATGAC GCGTTATAAG
CCTAGCCGGC GGACTTACTC AGAAATACTG CCCGAGATTC AGTACGCCCC AGACGACGAG
ATCCGAAAGG TCCAGGCCGA GGGTAAGGTG TCATTCAAAG GCCGATGTGT GCGCCTCGCG
AAGGCGCTCA GGGGGCAGCC GGTGGCATTT CGGCCAACCA TACGCGATGG CGAATATGGC
GTTTATTTCT GCAGCCAGAA AATCGCAGAA GTCGATCTCA AAGAACAAAA AGTGTAA
 
Protein sequence
MPWRPVDTMT LRFEFVHLAL QEGSNIAFLC KRFNISRPTG YKWISRFLET GVEGLIDLSR 
KPLTCPHKTV TATEDAILKL REEHQAWGAR KLRKRLEKLG HQGVPVPSTI TAILRRNGCI
DPAESDKHTA FQRFEHPYPN DLWQMDFKGS IPMKHHGRCH PLTVLDDHSR FSVVLVACAN
ERTETVKAAL IEAFRQYGLP YRMTMDNGSP WGNDQYNDLT PLTVWLIRNE IRVSHSRPYH
PQTQGKDERF HRTLVAEAIA GRVFEDLADC QLRFDTFRHC YNLERPHESL GMETPMTRYK
PSRRTYSEIL PEIQYAPDDE IRKVQAEGKV SFKGRCVRLA KALRGQPVAF RPTIRDGEYG
VYFCSQKIAE VDLKEQKV