| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0270 |
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| Symbol | |
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| ID | 6783096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 320485 |
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| End bp | 321711 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642766239 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002137097 |
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| Protein GI | 197116670 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.588803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCAAC TCCGCATTTT CCCCAAGAGC AGTTCCATAA GAAATCCCGA TTCCCTGCTG
CGCCTTTTCG TTATCATCGC GCTAGTTTCC ACCTTCGTCA TCACCATAGC GGCGGGTCTT
GTCTTCGTCG AGGTGCTGCA GCGCCATGTA ATCCGCAACG CCGAAGAAGA TGCCATAAAG
GTAAGCAGCG CCCTCCTCGC GACTGACCGT GCGCGCCTTA CCGCCAGGCA GGCCGACGGC
AGCGTCAAGG TTGCGGTCGC CTCGGCCGAC CTGCCGGAGA TGGACCGCCA CTTCAGGAAG
TTCCTTTCCC CCTTCGACAT CGTCAAGATC AAGATCTACT CCGCCGACAG CACCATCGTC
TACAGCACCG AGGCAAGCCT CATCGGCAAG GTCGACAACC ACAACTCCCG GCTGGACCAC
GCCTTGGAGG GGCTCTTCGA CTCGAAGCTG GAGAGGAAGG AAGAGGTGAA AGACCTGGCC
TCCGAGATGA AGTTCAACGT GGACGTAGTG GAAACGTACA TCCCGATCTG GGATAACGGC
CAAGTGATCG GGAGCTTCGA GGTCTACATC GACGTCACCG AGTACCGCCA CGATACGGCG
AATACCGCGT CCTTGGCGCT CGGCGCCCTG GCGGGCATCC TGGTCGTGGT TTTCGGCATC
TCTTACTTCC TGGTCCGAAA GGGGACGAGG GAGATCAAGG AGATCCAGGA GGTGCTGAAA
AAGCAGACCA TGACCGATGC CCTCACCGGG ACCTTCAACA AGGGCCAAAT CGAGCTTTTG
GCGTGCAAGG AGTTCGCCCG CTGTGTCCGC AGAAACGAGA AAGGGCTCGG GGACGCGGAC
CTGGGGTTCA TCATGATCGA CATCGACCGG TTCAAGGAAG TAAACGACAA CTACGGGCAT
CTGGCGGGGG ACGTCCTGCT GCAGCAGTTC GCGGCCAGGA TCGCGCGCTC GCTGCGCAAC
TACGATTCCA TCGGGCGTTT CGGCGGCGAG GAATTCCTGG TGATGCTCCC AGGCTCCGAC
CTCGAGCAGA CGCGGGCAGT CGCGCAGAAA ATTTGGTCCC TGCTTCGGGA AGAGCCTTAC
CTCGTCGATG GGCGTGAAAT CGACCTGACC GCGAGCCTCG GCGCCGCCGC CGTCAAAGAG
GGGGACGCCG ACCTGCTCCA TGTCCTCAAG CGGGCGGACC AGAGGCTCTA CGCCGCTAAA
AGCGCTGGGC GCGACCGGGT AGTCTGA
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| Protein sequence | MKQLRIFPKS SSIRNPDSLL RLFVIIALVS TFVITIAAGL VFVEVLQRHV IRNAEEDAIK
VSSALLATDR ARLTARQADG SVKVAVASAD LPEMDRHFRK FLSPFDIVKI KIYSADSTIV
YSTEASLIGK VDNHNSRLDH ALEGLFDSKL ERKEEVKDLA SEMKFNVDVV ETYIPIWDNG
QVIGSFEVYI DVTEYRHDTA NTASLALGAL AGILVVVFGI SYFLVRKGTR EIKEIQEVLK
KQTMTDALTG TFNKGQIELL ACKEFARCVR RNEKGLGDAD LGFIMIDIDR FKEVNDNYGH
LAGDVLLQQF AARIARSLRN YDSIGRFGGE EFLVMLPGSD LEQTRAVAQK IWSLLREEPY
LVDGREIDLT ASLGAAAVKE GDADLLHVLK RADQRLYAAK SAGRDRVV
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