| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0237 |
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| Symbol | |
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| ID | 6783062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 281441 |
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| End bp | 282574 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642766205 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_002137064 |
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| Protein GI | 197116637 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000118749 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGAAGA AAAATAATGT GACAAACCCC GCAGCGGCAC ATCTGGTCAC CGATCAAAAG
ACTTTAGACG AACTCGTTGA GCGGCTCTCC CGGGAGTCGG TCCTTGCCTT TGACTTGGAG
GCGGACTCAC TCCATCACTA TACAGAGAAG GTCTGCCTGA TCCAGGTCTC CTCCACATCG
GAAGACCGCC TGATCGACCC GCTCGCCCCC ATCGACGTCA AGGTACTGGC GCCCATTTTC
GCCAACCCGG CGATCAAAAA GATCTTCCAC GGCGCGGATT ACGACATGCG CTCGCTCTAC
CGGGACTTCG GCATCGAGGT GGTGAACCTG TTCGACACCA TGATCGCCAG CCAGTTCCTG
GGAGAGAGCG AGTTCGGCCT GGCGGCGCTT CTGAAGAAGA GGTTCGGCGT CGAGCTGGAC
AAGCGCTACC AGAAGGCCGA CTGGAGCAAG CGTCCCTTCT CCCAGGAGAT GCTGGATTAC
GCCATGAAGG ACACTTCCCT CCTGATCGAG CTCTACCGCC AGCTGGAGGC GGAGCTGAAG
CAGAAAGGGA GGCTCGCCTG GGTTGAGGAG GAGTCGGAGT TGGTGGCAGG GGTGCGTTCC
CCTTCCCGCG AGGGGGAGCT GATGTGCCTG CGCTTCAAGG GGGCCAGCAA GATGAAGCCG
CGCGAGCTCG CCGTGCTGGA AGAGCTGCTG CGCTTTCGTG ACGAGAAGGC ACGCCTGGCG
GACGTTCCCC CCTTCAGGAT CCTCAGCAAC GACCTGTTGC GGGAGCTGGC AGAGAAACAG
CCTAGGAACA ACTTCGAGCT GGTCGGCATC CACACCATGT CTTCTAAGCT GATCGAGCGG
CTGGGGCGCG GGCTGCTGCA GGCCGTAGCC AACGGGCTGG CGGTCCCTCA GGACAAGTTG
CCGCAAGTGC ATTCCGGACG CCGTCCGGTT CTGGACCGGC TGCAGGACGA AAGGGTGAAG
CGCCTCAAGG TCTGGCGCGA GGCGAAGTCG GCGCAGCTGG GTCTCGGTAT CGGGCTCGTC
GCCAACAACA CGCTCCTGGA GGCGCTGGCG GAGCCGGGCT CCCAGAACAT AACTCTCTTG
AAGCGTTGGC AGCGCGAGGC ATTCGGGGAC GAGCTGGCGT CGCTCATCTC CTGA
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| Protein sequence | MQKKNNVTNP AAAHLVTDQK TLDELVERLS RESVLAFDLE ADSLHHYTEK VCLIQVSSTS
EDRLIDPLAP IDVKVLAPIF ANPAIKKIFH GADYDMRSLY RDFGIEVVNL FDTMIASQFL
GESEFGLAAL LKKRFGVELD KRYQKADWSK RPFSQEMLDY AMKDTSLLIE LYRQLEAELK
QKGRLAWVEE ESELVAGVRS PSREGELMCL RFKGASKMKP RELAVLEELL RFRDEKARLA
DVPPFRILSN DLLRELAEKQ PRNNFELVGI HTMSSKLIER LGRGLLQAVA NGLAVPQDKL
PQVHSGRRPV LDRLQDERVK RLKVWREAKS AQLGLGIGLV ANNTLLEALA EPGSQNITLL
KRWQREAFGD ELASLIS
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