| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0192 |
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| Symbol | |
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| ID | 6783014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 226858 |
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| End bp | 227928 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642766158 |
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| Product | twitching motility protein |
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| Protein accession | YP_002137019 |
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| Protein GI | 197116592 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCCA AGATCTTCGT CCAAATACTT GAAATAGCCT TCAGCAAAAA GGTTTCCGAC
GTGCATTTCG AGGTGGACAA TCCCCCGTTT TTCCGCGGCA AGGGACAGAT CATCCGCTCC
AAGCTCCCCA GCCTCACCTC CGAGGATACG GAATTCATCG CGTCGCAGAT CATGGCACAC
AACAACCGCC GCTGGGAGGC CGACCAGAAG GAATACGACA CCTCCTTCTC CCTGCCGAGC
GGCGCGCGCT TCCGCGTCAG TATCTTCAAG CAGCGCGGGC ACTTCGGCAT CATCATGAGG
GTCATTCCCG CCAACATCGG CACCTTTGAA GAACTCCGCC TGCCGGCTGT GCTTGGGGAG
GTTGCCAAGG CACCCAACGG ACTCATCCTG GTGACCGGCC CGACCGGCAA CGGCAAATCG
ACCACCCTCG CCTCGATACT GCGCTACATC AACGAAAACC TCGCCTACAA CTGCATCACC
ATCGAGGACC CGATCGAATT CCTGTTCAAG TCCGAGAAGA GCTGCATCAT CCAGCGCGAG
GTGGGGATCG ACACCGACAG CTTCAGTTCT GCGGTAAAAG CCGCTTTGCG CATGGACCCG
GATCTGATCA TGGTCGGCGA GATGCGCGAC ACCGCCACCA TCGAATCCTG CCTGATGGCG
GCCGAGACCG GCCACCTGGT TCTCTCCACC CTGCACACCC AGGGTGCGGT ATCGACCATC
AACAGGATCG TCGGGCACTT CCCTCCCGAC GCCCAGGAGA TCGTGCGCCA AAGGCTTGCG
GACATCCTGG TCGCCACCGT CTCGATACGC CTGGTGATGA ACAAGACCGG AGAGGCGATC
CTTCCGGTCC TCGAGATCAT GCGCGCCACC ACCACCATCC AAAGCTGCAT CAGGGAGGGG
AGGCTGGACG AGATCGAGGC GCACATGGAG AACGGCCGCA GCCAATACCA GATGCAGACC
TTCGACCAGC ACCTGATCCA GTTGCACGAG CAGGAGCAGA TCACCATGGA GGACGCCAAG
CGGCTTTCCC ACTCCATGGA CCTGGAACGG AAACTGATGT TCACCAACTA G
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| Protein sequence | MDSKIFVQIL EIAFSKKVSD VHFEVDNPPF FRGKGQIIRS KLPSLTSEDT EFIASQIMAH
NNRRWEADQK EYDTSFSLPS GARFRVSIFK QRGHFGIIMR VIPANIGTFE ELRLPAVLGE
VAKAPNGLIL VTGPTGNGKS TTLASILRYI NENLAYNCIT IEDPIEFLFK SEKSCIIQRE
VGIDTDSFSS AVKAALRMDP DLIMVGEMRD TATIESCLMA AETGHLVLST LHTQGAVSTI
NRIVGHFPPD AQEIVRQRLA DILVATVSIR LVMNKTGEAI LPVLEIMRAT TTIQSCIREG
RLDEIEAHME NGRSQYQMQT FDQHLIQLHE QEQITMEDAK RLSHSMDLER KLMFTN
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