Gene Gbem_0111 details

Gene Information

• Locus tag: Gbem_0111
• ID: 6782933
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 133141
• End bp: 135186
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642766077
• Product: TonB-dependent receptor
• Protein accession: YP_002136938
• Protein GI: 197116511
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.643916
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTACCT GCATCTCCCG CCTTGTTACG GGGATCTTTC TTCTGACCAC GCTGGGCGCT 
CCCCTGGCCT TTGCGCAGCA GGAGGGGGAG GGAGCCGCCG CCCCGGCGCT GGGGGAAATG 
GACCTGGAAC AGTTGACCAA CCTCAAGGTG GAGCAGGTGT ACGGGGTCTC GAAGTTCGAA 
CAGGCGGTAA CGGAGGCTCC TGCCTCGGTC TCGGTGATCA CCGCCGACGA GATCAAGCAC 
TATGGGTGGC GTACCCTTGC CGACGTGATC AGGTCGAGCC GCGGGTTCTT CACGAGCTAT 
GACCGCAACT ACAGCTACAT CGGGACGCGG GGCTTCAGCC GCCCCGGGGA CTACAACACC 
CGCGTGCTCC TTCTGATCGA CGGGCACCGG ATCAACGACG CCATCTACGA GACCGCCGCG 
ATCGGAACCG AGTTCATACT CGATCTGGCG CTCATCGACA GGATCGAGAT CATCCGCGGG 
CCCAGTTCCT CGCTTTACGG TGCGGGCGCC TTCTTCGGGG TGATCAACGT CATCACCCGC 
AGCGCCAAAC AGATCGAGGG GGGGGAGGCG GCGGCCTCGG GGGGAAGCCA GCGGACCGGA 
GCCGGGCGCC TGACCTACGG GAAGAGTTTC GACGGCGGAG AGTTCGTCGC CTCCGGGTCG 
GCCTACAAAA GCCGCGGCAA CGACTCGCTC TTCTACCCCG AGTTCAACGA CCCCGCCACC 
AACAACGGCA TCGCAAGCAA CATGGACCGG GACCGGAATT ATTCCCTGTT CGCTTCCGGG 
CGCCTGCACG ACTTCACCCT GACCGGGGCG CTGATTTCCC GGGATAAACG GATCCCCACC 
GCTTCGTTCA ACACCATCTT CAACGACCCA CGGACCCATT CCGTCGACCG GCGCAGCTAC 
CTCGACCTCA AGTACGACAA GGCGTTGGAA GGGGGGACCG GCGTCACCGC CAGGCTCTTC 
TACGACGAGT ACCGCTACCA GGGGAATTTC GCCTACGAAA AAGGCCTGGA CGACCCCGGT 
TTCTACCCGC CCACCTACCT GAACCGGGAC GATCATCTGG CGCGCTGGTG GGGGGGGGAG 
GCCCAGGCGA GCCGCCAGGT CCTGCCGCGC CTGCAGCTTA CCGCCGGCGC CAGCTTCCGG 
GACAGCTTCC TAAAGCTTCC CAACTACGAC GCAGTGCCAC AGGGGCGCAG AGTGGAGAAC 
GACCACAGCG ACCTCTTCTT GGCCCTGTTC GGGCAGGGGG AGCTGCGCCT TTTCGAGCAC 
CTGATCGTCA ACGTCGGGGT CCGCCACGAC CACTACCAGA CCTTCGGCGG CGCGACCAGC 
CCGCGCCTGG CGGTCATCTA CACGCCGGTC GAAGGGACCG TCTTCAAGTA CATCGAGGGA 
AAGGCGTTTC GCGCCCCCAA CGCCTACGAG CTCTACTACA ACGACGTCTT CGACACCAAC 
GTCGCCAATC CGCGCCTGGC GCCCGAGACG GTCAGGACCA GGGAGCTGAT CTACGAGCAG 
TACCTGGGCG AGGTGCTTAG AACCAGCCTG AGCCTGTTCC AGAACAAGAT AGAGAACCTG 
ATCAGTTACC AGAACCTTCC TTCAGGAGAG GTATCCTTCG GCAACGCCGG CCGGGTGAAG 
GCGGTGGGAG GGGAGTTCGA GGTAGAGGGG CAGTGGGCAA GCGGCTTCGC GGCGAGGACC 
AGCTACAGCT TCGTCTCGGC CCGCGACGAG GGGCAGGACC AGCGGCTGGA CTACTCGCCG 
CGTCAACTGG CCAAGCTGAA CCTGACCGCG CCGCTTTACC GCAAGAAGCT TTTCGCTGGG 
GTGGAACTGC AGGGGACGGC CCGCCGCGAC TTCTCCCATA ACGGCGTGCA GACCGCGGCG 
CCGGGATACC TGATCGCCAA CGCCACCCTG TTCTCCACCG GGATACTCCC GTCGCTGGAC 
CTCTCTTTAT CCGTCTACAA CTTCCTGGAC CGGCGCTACC AGGACCCGGC CACGACCGAC 
CACAGGCAGA GCCTGATTGC GCAGGACGGC CGGACCTTCA GGGTCCAGGC CACCTACGGT 
TTCTGA 

 

Protein sequence

MGTCISRLVT GIFLLTTLGA PLAFAQQEGE GAAAPALGEM DLEQLTNLKV EQVYGVSKFE 
QAVTEAPASV SVITADEIKH YGWRTLADVI RSSRGFFTSY DRNYSYIGTR GFSRPGDYNT 
RVLLLIDGHR INDAIYETAA IGTEFILDLA LIDRIEIIRG PSSSLYGAGA FFGVINVITR 
SAKQIEGGEA AASGGSQRTG AGRLTYGKSF DGGEFVASGS AYKSRGNDSL FYPEFNDPAT 
NNGIASNMDR DRNYSLFASG RLHDFTLTGA LISRDKRIPT ASFNTIFNDP RTHSVDRRSY 
LDLKYDKALE GGTGVTARLF YDEYRYQGNF AYEKGLDDPG FYPPTYLNRD DHLARWWGGE 
AQASRQVLPR LQLTAGASFR DSFLKLPNYD AVPQGRRVEN DHSDLFLALF GQGELRLFEH 
LIVNVGVRHD HYQTFGGATS PRLAVIYTPV EGTVFKYIEG KAFRAPNAYE LYYNDVFDTN 
VANPRLAPET VRTRELIYEQ YLGEVLRTSL SLFQNKIENL ISYQNLPSGE VSFGNAGRVK 
AVGGEFEVEG QWASGFAART SYSFVSARDE GQDQRLDYSP RQLAKLNLTA PLYRKKLFAG 
VELQGTARRD FSHNGVQTAA PGYLIANATL FSTGILPSLD LSLSVYNFLD RRYQDPATTD 
HRQSLIAQDG RTFRVQATYG F