Gene Gbem_0030 details

Gene Information

• Locus tag: Gbem_0030
• ID: 6782848
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 35773
• End bp: 37770
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642765992
• Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein
• Protein accession: YP_002136857
• Protein GI: 197116430
• COG category: [C] Energy production and conversion
• COG ID: [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAGAA TCGGTGTTTT TGTGTGCCAC TGCGGCGAGA ATATCTCCCG TACCGTGGAT 
GTGGAGCAGG TGGCCCGAGC CGCCGGGAAG ATCTCCGGCG TAGCTTACGC CTGCGATTAC 
AAGTACATGT GTTCCGACCC GGGGCAGAAC CTTTTGAAGA AGGCCGTATC CGAGCACAAG 
CTAGACGGCG TGGTGGTGGC GGCGTGCAGC CCTCGCATGC ACGAGAAGAC CTTCAGGAAA 
GCGGCATCGG CCGCGGGTCT CAACCCGTAC CTCTGCGACA TGGCCAACAT CCGCGAGCAC 
TGCTCCTGGG TCCACGAGGA CAAGAAACTT GCGACGTCGA AGGCCAGCGA CATCGTGAAG 
CTCATGGTGG AGCGGGTCAA GAAGGGTAAG TCGCTCGCGC CCATTACCGT GCCGGTCACC 
AAGCGGGCGC TTGTCATCGG CGGGGGGATC GCGGGAATCC AGGCAGCGCT CGACATCGCC 
GACGCGGGGC ACCAGGTGGT GCTGGTCGAG CGCGAGCCCT CCATCGGCGG GCACATGGCG 
CAGCTCTCCG AGACCTTCCC GACGCTTGAC TGCTCCCAGT GCATCATGAC CCCGAAGATG 
GTCGACGTCG CCAACCACCC GAACATCACC CTGCACACCT TTTCCGAGGT CGAGAAGGTC 
GAGGGGTACA TCGGCAACTT CCAGGTCACG CTGAAGCACA AGGCGCGCTC GGTGAATGAG 
TCGAAGTGCA CCGGCTGCGG CATCTGCATG ACCAAGTGCC CGAAGAAGAA GATCCCCAAC 
GAGTTCGACC AGGGGCACGG GCTGCGCACC GCCATCTACG TCCCCTTCCC GCAGGCGGTA 
CCGAACACCC CGGTCATCGA CCGCGAGAAC TGCACCATGT TCCAAAGCGG CAAGTGCGGC 
GTCTGCGCCA AGGTCTGTGG GCCGGGAGCG GTGGACTACC AGCAGGAGGA TCGTTTCTCC 
GTCGAAGCCG TGGGCGCCGT CGTGGTCGCC ACCGGATTCA AGCTCTACTC CATAGACAGA 
AAGCCTGAGG ACAGCCCGAT CCAGGGGTAC GGCGAGTTCG GCTACGGCGC CATCCCCGAC 
GTCATCGACG GCATGACCTT CGAACGGCTC GCCTCCGCCT CAGGTCCTAC CGGCGGCAAG 
ATCCTGAGGC CGTCCGACGG CAAGGAACCG AAGCAGGTGG TATTCATCCA GTGCGTCGGC 
TCCCGCGCCA GGGAGAAAGG GATCTCCTAC TGCTCCAAGG TCTGCTGCAT GTACACCGCG 
AAGCACACCA TGCTCTACCA CCACAAGGTG CACGACGGCC AGGCATACGT CTTCTTCATG 
GACGCGAGGA CCCCGGGGAA GGGGTACGAC GAGTTCTGGA GGCGCGCCGT CGAGGAAGAG 
GAGGCGGTCT ACATCAGGGG GATGGTCTCC CGCCTGTACC AGAAGGGCGA GAAGATCGTG 
GTGATGGGGA GCGATATTCA AGTCGGCGTG CAGGTGGAGA TCGAAGCCGA CCTGGTGGTC 
CTGGCCACCG CGGTGCAGGC CCAGGACGGA GCCGACCAGC TGGCACAGAA GCTGGGCATC 
TCCTACGACA AGTACAACTT CTACTCCGAG GCCCACGCGA AGCTGAAGCC CGTCGAGTGC 
GCTACCGCCG GGATCTATCT GGCCGGGGCC TGCCAGGGGC CGAAGGATAT CCCGGACACG 
GTGTCCCAGG CTTCCGCCGC CGCGGCCAAG GTGATGACAC TCTTCTCCAA GGACCAGTTG 
GAGCGCGACC CGGTGGTCGC CAAAGTCAAC GAGAAATACT GCGTCGGCTG TCTTGCCTGC 
AAGAAGGTCT GCCCCTACGG CGCCGTCGAG GAGAAGGAAA TCAGGGACCG CCAGGGGAAT 
CTGGTCAAGG TAGTGGCCTA CGTGAACCCC GGCGTCTGCG GCGGCTGCGG CACCTGCCAG 
GCCACCTGTC CGTCCAAGAG CGTCGAGCTC GACGGCTACA CCGACGAGCA GATCATGGCG 
ATGATCGAAT CGCTTTAA 

 

Protein sequence

MSRIGVFVCH CGENISRTVD VEQVARAAGK ISGVAYACDY KYMCSDPGQN LLKKAVSEHK 
LDGVVVAACS PRMHEKTFRK AASAAGLNPY LCDMANIREH CSWVHEDKKL ATSKASDIVK 
LMVERVKKGK SLAPITVPVT KRALVIGGGI AGIQAALDIA DAGHQVVLVE REPSIGGHMA 
QLSETFPTLD CSQCIMTPKM VDVANHPNIT LHTFSEVEKV EGYIGNFQVT LKHKARSVNE 
SKCTGCGICM TKCPKKKIPN EFDQGHGLRT AIYVPFPQAV PNTPVIDREN CTMFQSGKCG 
VCAKVCGPGA VDYQQEDRFS VEAVGAVVVA TGFKLYSIDR KPEDSPIQGY GEFGYGAIPD 
VIDGMTFERL ASASGPTGGK ILRPSDGKEP KQVVFIQCVG SRAREKGISY CSKVCCMYTA 
KHTMLYHHKV HDGQAYVFFM DARTPGKGYD EFWRRAVEEE EAVYIRGMVS RLYQKGEKIV 
VMGSDIQVGV QVEIEADLVV LATAVQAQDG ADQLAQKLGI SYDKYNFYSE AHAKLKPVEC 
ATAGIYLAGA CQGPKDIPDT VSQASAAAAK VMTLFSKDQL ERDPVVAKVN EKYCVGCLAC 
KKVCPYGAVE EKEIRDRQGN LVKVVAYVNP GVCGGCGTCQ ATCPSKSVEL DGYTDEQIMA 
MIESL