Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_3112 |
Symbol | |
ID | 7976757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 3130227 |
End bp | 3133025 |
Gene Length | 2799 bp |
Protein Length | 932 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644799898 |
Product | S-layer domain protein |
Protein accession | YP_002951037 |
Protein GI | 239828413 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000330769 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTATC AACCTAAGTC CTATCGCAAG TTTGTTGCGA CAACTGCAAC AGCTGCCATG GTAGCATCTG CGGTAGCTCC TGTAGTATCT GCAGCAAGCT TCACAGATGT TGCGCCGCAA TATAAAGATG CGATCGATTT CTTAGTATCA ACTGGTGCAA CAAAAGGTAA AACAGAAACA AAATTCGGCG TTTACGATGA AATCACTCGT CTAGATGCGG CAGTTATTCT TGCAAGAGTA TTAAAACTAG ACGTTGACAA CGCAAAAGAC GCAGGCTTCA CAGATGTGCC AAAAGACCGT GCAAAATACG TTAACGCGCT TGTAGAAGCT GGCGTATTAA ACGGTAAAGC ACCTGGCAAA TTTGGTGCAT ACGACCCATT AACTCGCGTT GAAATGGCAA AAATCATCGC GAACGCTTAC AACTTAAAAG GTGACGATGT AAAACTTCCA TTCACTGATG TAAACGATAC ATGGGCACCA TACGTAAAAG CGCTTTATAA ATACGAAGTA ACAAAAGGTA AAACACCAAC AAGCTTCGGT GCATACCAAA ACATCACTCG CGGTGACTTT GCGCAATTTG TATATAGAGC GGCAAATGTT AATGTAGCAC CACAAGTAGT TTCGGTAAGT GCGATTACTA CTACTAAAGT AAAAGTTACA TTTAACAAGG AAATCGAAGG ATTAACTCGT GATTCGTTTA CAATTAAGAA CAAAGCTACT GGGGAAAAAC AATATGTCAA GGCTGTAACT GTTGCTACTG ATAAGAAATC AGCTGAAATT GAGTTGTATG ATGCATTAAA ATCAAAAACA ACTTATAGCA TAGATGTTAA AGTTGGCGAT CAAACTCTTA ATGCTGAATT AGACTTTGTT ATTGGTGAAG TTGCACAAAT CATTGCTGAA GACCAAACAA TTCCAGCAAA AAAAGAAACT GCAATTAAAT ACCAAGTCCT TGATACAAAT GGTTTAGATA TAACTGCTGA TACAAAAGTA AGCTTTGCTT CTGATAAAAA TATTACTGAT GGTAAGATTA CATTAGATGC TGGTGAATTT GCATTTGTAG AAATTTCAGC AACTAAAGCA GATGGAACAG TTGTAAAATC TAAACGTATT AAAGTAGCAG CAGAAGCAGC TAAAGCCGTT GATATGCCTA AGTTTACTGT TGCTGATGGT CAAGAAGTAG ATTGGGCGAA AGATACTTTA ACAAACAAAG TTCGAATGGG AACTACTCCA TTCTTAAAAG CACAATTTAA AGATCAATTC GGTGGAGATT ACACTGGAAC AGTAGAATTT GAATCTTTAG ATAAAGAGGT TGCATTGGTA GACCGTGTAA CTGGTAAAAT TACTCCATTA AAAGAAGGAA AATTACCAGT TCGTATTAAA AATGGTGATT TCACTAAGAC TGTAGAATTG GAAGTTGTTG CAGCTTCAAA ATTAACTTCA CTATCAGTAG AAAATTCTAC ACTTAACGTA ACAACTGTTA AGCCAACAGG AACAGTGAAA ATCACTGCAT TAGACCAATA TGGAAATAAA TTCAATGCAG GAGAGGCTAC CGTTAAAGTA TTAAGTGGTG CTGAATACTT AAACAGTACA CCATCTGTTA AAGATGAAAA TAATGGAGAA TATACTTTAA CTGTTACTGG TAAAGCAGAA GGTACTGCAG TTGTTGAAGT GACAATCGGT ACATTAAAAC AAAACATTAC TGTAAATGTT AAGAAGCCGG GAACAGCCGT TGACTATAAT GTAAAAGGTT TCAAAGCTGA GCTAGATAAA GTTGATGATA AATCTACTAC AGATGATGAA ACAAAAATGG TACTTGAAGT GTACCCAGTA GATGCTAATG GTTTAGAAAC TGACCAAGCT GTTAAATCAA CTGTAAAAGT GTATGATCAG GATAACAAAG AGGTAGAAAA AGTAGTTAAA GAAGATGATA ACAGATACAC AATTGATGCA ACAGATTCAA AATTTGAACC TGGCAAAACT TACACAGTTA AAGTTCTAGT AAACAACTTA GAAGTCTTCT CTAACACATT CACTGTTAAG GATTCTACTA AGTATCCAAC ATTGCGTTTA ACTGCTAGCA CAGTTGAAAT TGATATTGAT GGTGAAGATA ATACTTTAGA AGCAGCACTT GAGAAGATCT TAGAAGTAAC AGCACCAAAC GGTACATTAG CTTCTAAAGC TACTGTATTG GATGTTGAGT TTGTATCCGA CAATGAAAGT GTTATCGTAG ACAAAGGTAA TGATAAATCT TCACCGACAG GATTAGGTAA TGCAACTGTA GCGATATCAG AAGTAAAAAT TGACCTAGAT GGTGATACTT CTACTGAAAC TGATCAATAT AAAATTAAAT TTAATTCAAA CTTAAATGTA GTTGTCGTTG ACAGAACTGC ACCTACTGCA ACAATTAATC ATGCAGTGGA AAGTTTTGGC GATGACGGTA AACTTCCAGT AACTACAGTT AAGTTTAGTG AAGCTGTAAA AGCATTCACT ATCAAATATA ATAACAGTGA AATTACCTTT GAGGTAAAAG ATGATGGTAC TCTTACAGCT AAAGATAGTT CTGGAAAAGA AGTACCTGCT GTAGAAATTA CGAATACAGC TATTAAAGAT GCAGGTTATA AACAATATAA TGTGGGTAGC GATAATATTA AAATTAAGTT CGATATTAAC ACTAATACTG CTTATGCTGT CTGGACAAAT AGTGCTAGTG TAGAACAAAT CAAACAAAGC TTTAATGATG CATTTGAAAT TAAAGCTACT GATAAAGCAG GTAATACTTC AGATGATTTG GCTAAATAA
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Protein sequence | MAYQPKSYRK FVATTATAAM VASAVAPVVS AASFTDVAPQ YKDAIDFLVS TGATKGKTET KFGVYDEITR LDAAVILARV LKLDVDNAKD AGFTDVPKDR AKYVNALVEA GVLNGKAPGK FGAYDPLTRV EMAKIIANAY NLKGDDVKLP FTDVNDTWAP YVKALYKYEV TKGKTPTSFG AYQNITRGDF AQFVYRAANV NVAPQVVSVS AITTTKVKVT FNKEIEGLTR DSFTIKNKAT GEKQYVKAVT VATDKKSAEI ELYDALKSKT TYSIDVKVGD QTLNAELDFV IGEVAQIIAE DQTIPAKKET AIKYQVLDTN GLDITADTKV SFASDKNITD GKITLDAGEF AFVEISATKA DGTVVKSKRI KVAAEAAKAV DMPKFTVADG QEVDWAKDTL TNKVRMGTTP FLKAQFKDQF GGDYTGTVEF ESLDKEVALV DRVTGKITPL KEGKLPVRIK NGDFTKTVEL EVVAASKLTS LSVENSTLNV TTVKPTGTVK ITALDQYGNK FNAGEATVKV LSGAEYLNST PSVKDENNGE YTLTVTGKAE GTAVVEVTIG TLKQNITVNV KKPGTAVDYN VKGFKAELDK VDDKSTTDDE TKMVLEVYPV DANGLETDQA VKSTVKVYDQ DNKEVEKVVK EDDNRYTIDA TDSKFEPGKT YTVKVLVNNL EVFSNTFTVK DSTKYPTLRL TASTVEIDID GEDNTLEAAL EKILEVTAPN GTLASKATVL DVEFVSDNES VIVDKGNDKS SPTGLGNATV AISEVKIDLD GDTSTETDQY KIKFNSNLNV VVVDRTAPTA TINHAVESFG DDGKLPVTTV KFSEAVKAFT IKYNNSEITF EVKDDGTLTA KDSSGKEVPA VEITNTAIKD AGYKQYNVGS DNIKIKFDIN TNTAYAVWTN SASVEQIKQS FNDAFEIKAT DKAGNTSDDL AK
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