| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2756 |
|---|
| Symbol | |
|---|
| ID | 7977980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2792012 |
|---|
| End bp | 2793424 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644799552 |
|---|
| Product | dipeptidase |
|---|
| Protein accession | YP_002950711 |
|---|
| Protein GI | 239828087 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01887] dipeptidase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCG ATTGGATGGA AGAGGTATTG AAGCGAAAAG AGGCGCTTAT TCAAGATACG
CAGGCGCTAT TGCGCATTCC GAGTGTTCTC GATGAAGAGA ATGCAACAGA AGAAGCCCCG
CTTGGACAAG GAGTATACGA GGCGTTGCAG TTTTTATTGC AGAGGGGCCA AGAAGAAGGG
TTTGCGGTAA AAAACGTCGA TGGCCTCGCG GGACATCTTG AAATCGGACA AGGAGAGGAA
CTCATCGGCG TATTATGCCA TGTGGATGTT GTACCACCGG GAGATGGCTG GTCAAGCGAC
CCGTTTGCTG CAGAAATCCG TGATGGGAAA TTATATGCTC GCGGCGCGAT TGACGATAAA
GGACCAACAA TGGCTGCATT TTATGCTATG AAAATTGTGA AAGAACTCGG GTTGCCATTG
CAAAAACGAG TGCGTATGAT TGTTGGAACA GATGAAGAAA GCAAGTGGCG TTGTGTCGAA
CATTATTTTA AGCATGAGGA AATGCCGACA ATGGGATTTG CTCCGGATGC GGATTTTCCG
ATTATTTACG CGGAAAAAGG AATTGTCGAT ATGGATTTGC GCAAGCCATC AATAGGAACA
CAGGAAGAAA GTGAAATTCA GCTGCAGTCG TTCCAGGCAG GACGACGTTA TAATATGGTT
CCTGACTTTG CTAAAGCGGT ATTGCTCGTT CGTGCAGACC GGCAACAAGA AATCGAACAG
CAGTATCGCC AGTTTCTTCA TGAAACGAGC ATGAATGGAA ATGCTGTTGT GGGAGGCAAT
ACCGTTACTC TTCAATTAGA AGGAATTTCC GCTCATGCGA TGGAACCAGA AAACGGGAAA
AATGCAGGTT TATGGCTGGC GAAGTGGCTA TCAGATGTTG CGTTGGATAC GCAGGCGCAA
TCGTTTATCC GTTTTGTGAC GGACTATTTC TTTGCCGATT CTCGTGGAAA AGCGTTAGGC
ATTGCTTACA ACGATGAGAT TACCGGCGAT TTAACAGTCA ATGTTGGAAT ATTATCATAT
GATGCGCAAG CTGGAGGAAA GCTTGGCATT AACATACGCT ATCCGGTCAC CAATGATATA
GAACAAACGA AGCAAAAACT ACAGAACATC GCAGCGCAGC ATGGTTTTGC GTTGGAACAT
TTTAGCGATT CAAAACCGCA CTATGTTGAT CCAAATCATG TACTTATAAA GACGCTTCAA
CGCGTATACG AAGAACAAAC AGGAGAACGC GCTTCCTTGC TTTCCATCGG CGGCGGTACA
TATGCCCGTT CGCTGAAAGC GGGAGTAGCG TTTGGACCGC TGTTTCCGGG ACGGCCGGAT
GTGGCGCATC AAAAGGATGA ATATATCATG ATCGATGATT TATTGAAAGC AACCGCGATT
TACGCTCAGG CAATTTATGA ATTAGCAAAA TGA
|
|---|
| Protein sequence | MNIDWMEEVL KRKEALIQDT QALLRIPSVL DEENATEEAP LGQGVYEALQ FLLQRGQEEG
FAVKNVDGLA GHLEIGQGEE LIGVLCHVDV VPPGDGWSSD PFAAEIRDGK LYARGAIDDK
GPTMAAFYAM KIVKELGLPL QKRVRMIVGT DEESKWRCVE HYFKHEEMPT MGFAPDADFP
IIYAEKGIVD MDLRKPSIGT QEESEIQLQS FQAGRRYNMV PDFAKAVLLV RADRQQEIEQ
QYRQFLHETS MNGNAVVGGN TVTLQLEGIS AHAMEPENGK NAGLWLAKWL SDVALDTQAQ
SFIRFVTDYF FADSRGKALG IAYNDEITGD LTVNVGILSY DAQAGGKLGI NIRYPVTNDI
EQTKQKLQNI AAQHGFALEH FSDSKPHYVD PNHVLIKTLQ RVYEEQTGER ASLLSIGGGT
YARSLKAGVA FGPLFPGRPD VAHQKDEYIM IDDLLKATAI YAQAIYELAK
|
|---|
| |