Gene GWCH70_2285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_2285 
Symbol 
ID7977784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand- 
Start bp2332190 
End bp2332612 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content42% 
IMG OID644799099 
Productmethylmalonyl-CoA epimerase 
Protein accessionYP_002950259 
Protein GI239827635 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR03081] methylmalonyl-CoA epimerase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0000102737 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTAA AAAAAGTAGA CCATGTTGGA ATTGCCGTTA AGTCTATCGA GAAAGCGTTG 
CCATTTTATG CCGATATTTT GCAGCTGAAG TTGCTTGGCA TCGAGGAAGT GGAATCAGAA 
AAAGTAAAAG TCGCTTTTTT AAAGGCAGGA GAGACAAAAA TTGAATTATT AGAGCCGACG 
TCGCCAGATA GTGCGATCGC TAAGTTTATC GAAAAACGAG GAGAAGGAAT TCATCACGTT 
GCACTTGGTG TTGATCATAT TCAAGAACGT ATTAATGAAT TAAAGGAAAA AGGAATTCGC 
ATGATTCAAG ATGCACCAAA ACGCGGCGCT GGCGGGGCGC TCGTTGCGTT TATGCATCCG 
AAATCAACAG GAGGCGTTTT GTATGAACTT TGCGAAAAGA CGGATGCGGA GGTGCAGCAA 
TAA
 
Protein sequence
MDVKKVDHVG IAVKSIEKAL PFYADILQLK LLGIEEVESE KVKVAFLKAG ETKIELLEPT 
SPDSAIAKFI EKRGEGIHHV ALGVDHIQER INELKEKGIR MIQDAPKRGA GGALVAFMHP 
KSTGGVLYEL CEKTDAEVQQ