Gene GWCH70_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1920 
Symbol 
ID7978746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand- 
Start bp1978039 
End bp1978671 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content42% 
IMG OID644798751 
Productprotein of unknown function UPF0005 
Protein accessionYP_002949921 
Protein GI239827297 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.049347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATTATT CAACAACGTA TTCATCTAGT CCCATTGCTA AACTGACAAC CACATTTTTT 
TTAGCATTGG CAGTGGCAAC AGGGGGTCTT TACATCGGTC AATGGATTCC AATAGGGATG 
TATTTGCCGC TTACAATACT TGAGATCATT TTATTAATGG TCATGGTGTT TGCCCGCAGC 
AAAAAAGCGG TCGGCTATCC GCTTATGTAC AGCTTTATGC TCGTATCTGG CGCGACGCTA 
TATCCACTCA TCGGGCACTA CGTTGCCGTT ATTGGCGCTG AAGCGGTACT TAAGGCGTTT 
GCGCTGGCGG TTGTTTCGTT TTCCGGCGTA GCGATTTATG CAGCGAAAAC GAAAGAAGAT 
TTTTCGTTTC TTGGCGGTTT TTTAACATTA GGCGCATTTG CGCTGCTTGG CCTTCTCATT 
ATCCAATGGT TCATCCCATT TTCTAGCGTT GGACAAATGG GGATTTCCGC GTTAGGAATT 
CTCATTTTTC TAGGCTTTAC CATTTATGAT ATCAACCGCC TTTCCCGCCA TGGTTTTACG 
GAAGCGGAAA TTCCAATGAT TGTTGTTAAC ATTTATCTTG ATTTTATTAA CTTGTTTATT 
CCTGAATCCG TGATGGTTGG AAATCAACTT TGA
 
Protein sequence
MNYSTTYSSS PIAKLTTTFF LALAVATGGL YIGQWIPIGM YLPLTILEII LLMVMVFARS 
KKAVGYPLMY SFMLVSGATL YPLIGHYVAV IGAEAVLKAF ALAVVSFSGV AIYAAKTKED 
FSFLGGFLTL GAFALLGLLI IQWFIPFSSV GQMGISALGI LIFLGFTIYD INRLSRHGFT 
EAEIPMIVVN IYLDFINLFI PESVMVGNQL