| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1647 |
|---|
| Symbol | |
|---|
| ID | 7976363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 1724843 |
|---|
| End bp | 1726657 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 644798527 |
|---|
| Product | protein of unknown function DUF450 |
|---|
| Protein accession | YP_002949699 |
|---|
| Protein GI | 239827075 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
|---|
| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.573593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGTAG AACACAATTT AAATTTAAAA AGTATCCTTA CAGAACAAGG ATTTAACTAC
TATGTTTCTA AAGATATGGA AACGAATCTT TCTGTAGAAG GGATATTAAC AGAGGAATTT
GTCAATTCGA TAACTAAAAT TAATCCATTT ATTAATAAAT CCGAAGCATT TTCTCTTATG
AAAGAGAAAT TTAGTGGAAC ATCGCAATCA GTTTTTACAA ATAAAACGTT TATTAAGACA
TTGCAGGAAG GACTTCCGAA GAAGATAAAC GGTAAAATAA AAAATATTAG ATTTATCGAT
TTGGAGAACC TGAATAACAA CCAGTTCTCG GTTATTGAAG AATATCGTTT CGAAAAGAAT
GGGCGGACAA CTATTGTTGA TTTCGTTTTA TGTGTTAACG GCTTACCTAT AATAATCATT
GAAAAAACAA GCGCAGTTGA ACATGGATTT ATGAGGTTAA AGCGCTACAT GGAAGATGTC
CCTATTTTTG CTATTTGTGA GTTGTTCTCA GTGATTATAG ATGGAATTAC AGTTAGATAT
GCTATGATTA GCGATTTTGC TGAGCGGAAT GAATATGAAA TTAGCTCATT TGATACATTC
GTCAAGGAAA TGCTCACACC GATATCGCTT TTAGAACTTA TAAAAGATTA CACTATTTTT
TTAGACAATA ATGGAGTGTC ACGGAAATTT ATCTTTAAGG ATTACCAGCG TAGAGCTATT
TCGAAAACAA TACATAAACT TATCACAACC ACTGAAAAGA GAGTCGGGAT AATTAATCAG
CAATTTGGAA CGGGACAAAC CCTAACGTTA TTACATTTAG CGAGAAATAT CCTCACTTCA
AGAAGTTTGA ATAGTCCAAA AGTGTTAATT GTTACGGATA GGATTTCTAA AAGTGAGCAA
TTATTACATG TATTTCACTC AACATACGGT TTAATAGCGC AAATAGCCAA GTCGAGTGAT
GATTTGTATG CTCTTCTTCA TAATGAATCT GTTCCTATAA TCTTTACTAC GGTTCAGAAA
TTCCGTGAAG AATATAAAAT TGATGAAGAG ATCATTGTAA TTGTTGATAA TTGTCATCGA
ACACAGACTG GAAGCTTTGC TTTAAATATG AGAAATGCTA TCCCTAATGC AAGAATAATC
GGCATCACTT CTTTAACTGT TACTAAAAAA ATAAAGCAGC TGTTTGGCGA GGTTATCGAG
CAGTTTACGA TGGAAGATGC GATACAAAGA GGGTTAATGT TACCAGTATA TTATGAGAAT
AGAGTTGATT TTAAAAGTAA CTTAATTGTT TTAGATACGG ATGAGGAAAC ATCTCACTTA
GAAGTTAAGA AAAAAGCTTT TGATATCATT AACCATTTCA ATTCTCACTG TCAAAGTAAT
AGTTCAAAAG GTTTGCTGAT AACAAAAAAT AGGTTAGACG CAATCCGCTA TAAAGCAATT
TTTGATGAAA TTAACCATAT AGAAGCGGCC TTATATATTT CTGTACATCA ACATGATTCT
CAAGAAATAA AAAGAATTCT AGAAAATAAA AATGAGGTTT TGCAACGTTT TTGTAACGAG
GAAGATAATT TGAAAATACT TATTACTTGT TCCGCTATTC CAGCGTCATT GCCTTTTGTA
CAAATCGCTT ATCTTGATAA GTTCATATCT GAGAACTTAA TGCAAGAAAT TATTGGTTTA
TTAGGGATGA GATATAAAGA TAAACAATAT GGCTTAATTG TTGATTATGA TGGGAGAAAT
AACGTAACAA TAATACAAAA AATAAAATGC ATAGATTCTG TCGATACTAA GGGGGGAAAA
CAATGGGAGT ATTGA
|
|---|
| Protein sequence | MFVEHNLNLK SILTEQGFNY YVSKDMETNL SVEGILTEEF VNSITKINPF INKSEAFSLM
KEKFSGTSQS VFTNKTFIKT LQEGLPKKIN GKIKNIRFID LENLNNNQFS VIEEYRFEKN
GRTTIVDFVL CVNGLPIIII EKTSAVEHGF MRLKRYMEDV PIFAICELFS VIIDGITVRY
AMISDFAERN EYEISSFDTF VKEMLTPISL LELIKDYTIF LDNNGVSRKF IFKDYQRRAI
SKTIHKLITT TEKRVGIINQ QFGTGQTLTL LHLARNILTS RSLNSPKVLI VTDRISKSEQ
LLHVFHSTYG LIAQIAKSSD DLYALLHNES VPIIFTTVQK FREEYKIDEE IIVIVDNCHR
TQTGSFALNM RNAIPNARII GITSLTVTKK IKQLFGEVIE QFTMEDAIQR GLMLPVYYEN
RVDFKSNLIV LDTDEETSHL EVKKKAFDII NHFNSHCQSN SSKGLLITKN RLDAIRYKAI
FDEINHIEAA LYISVHQHDS QEIKRILENK NEVLQRFCNE EDNLKILITC SAIPASLPFV
QIAYLDKFIS ENLMQEIIGL LGMRYKDKQY GLIVDYDGRN NVTIIQKIKC IDSVDTKGGK
QWEY
|
|---|
| |