| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1271 |
|---|
| Symbol | |
|---|
| ID | 7979080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1320524 |
|---|
| End bp | 1321492 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644798216 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002949389 |
|---|
| Protein GI | 239826765 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAT TTATATTGCG ACGAATCATA ATGATGATTC CGCAACTATT TCTTTTAAGT
GTTCTCGTAT TTTTGCTGGC AAAGGCGATG CCGGGGGATG CATTGACAGG ACAATTGGCA
GGAAATCCAA AAATGGATGC GCAAACATTA GAGGAAATGA AAGAAAAGCT CGGACTTAAT
GATCCGATAC ATATTCAATA TGTACGTTGG ATGAAAAACT TGCTGCATGG AGATCTTGGC
ATGTCCTATA CTCATCAGCA GCCTGTCAAC GATTTGCTAG CTGGGCGAAT GTGGAATACG
ATTTTGTTAT CTGCCGCGAT TTTGATACTA ACGTATATGA TCGCGATTCC TTTAGGAATT
ATTTCGGGAA GATGGACCGA CTCTTGGGCG GATAAGTTAA TCGTTGGATA CAGCTACGTT
AGCTTTGCAA CACCGTTGTT TATCTTTGCG TTAATTATGT TGTTTATTTT TGGGTTCAAA
CTAGGATGGT TTCCGACGGG AGGAAGCGTC GATATTCAAG TGGAAAAAGG AACGTTTGAC
TATTATGTAA GCAAGCTGAA CCATCTTTTG CTTCCGGCTC TGTCTGGAGC GCTGATCAAT
ACGGTCGGGA CGATTCAATA TTTGCGCAGT GAAATTATCG ATACAAAGCT GAAAGATTTT
GTTAAAACCG CGCGCGCAAA AGGAGTGCCG GAATCAAGCA TTTATTGGCG CCATATTTTA
CGAAATTCGT TTTTGCCGAT TGCTGCTTTC TTAGGATATG AGATTACAGG ATTAATTGGC
GGATCGATCT TTCTCGAATC TATTTTTAGT TATCCAGGGA TTGGACAATT GTTTTTGCAA
TCAATTCTGC AGCGGGATTA CAGCGTTGTC ACCGCGCTCG TGATGATTTC CGGCCTTGCT
ACCTTAATCG GGACGCTTTT ATCCGATATT ATCTTAAGCG CTGTTGATCC ACGTATTCGC
ATTGAGTAA
|
|---|
| Protein sequence | MLKFILRRII MMIPQLFLLS VLVFLLAKAM PGDALTGQLA GNPKMDAQTL EEMKEKLGLN
DPIHIQYVRW MKNLLHGDLG MSYTHQQPVN DLLAGRMWNT ILLSAAILIL TYMIAIPLGI
ISGRWTDSWA DKLIVGYSYV SFATPLFIFA LIMLFIFGFK LGWFPTGGSV DIQVEKGTFD
YYVSKLNHLL LPALSGALIN TVGTIQYLRS EIIDTKLKDF VKTARAKGVP ESSIYWRHIL
RNSFLPIAAF LGYEITGLIG GSIFLESIFS YPGIGQLFLQ SILQRDYSVV TALVMISGLA
TLIGTLLSDI ILSAVDPRIR IE
|
|---|
| |