| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0438 |
|---|
| Symbol | |
|---|
| ID | 7978593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 491881 |
|---|
| End bp | 493404 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644797419 |
|---|
| Product | succinate CoA transferase |
|---|
| Protein accession | YP_002948619 |
|---|
| Protein GI | 239825995 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0427] Acetyl-CoA hydrolase |
|---|
| TIGRFAM ID | [TIGR03458] succinate CoA transferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATAAAC AAATTTTCGA ATTAATCGGT AATTCTCGTT TAAGGAGCCG AATTGTAACA
GCAGAAACAG CAGCTTCATG GATTAAAGAC GGTATGACGC TCGGTTTGAG CGGATTTACC
CGCGCGGGCG ATGCCAAGGC AGTTCCTTTT GCACTGATTG AAAAAGCAAA ACAACAACCT
TTAAAAGTAA ATGTATATAC AGGCGCCTCA CTAGGCTCGG ATATTGATAA AACAATGGCA
GAAGCAGGAA TTATCAATAA ACGGCTTCCG TTTCAGGCTG ATTCTGTTAT GCGCAAAAAA
ATTAATCAAG GGGAAATCTT GTTTATTGAT CAACATTTAT CACATACAGC AGAATTAGTG
CGTGCAGACG TATTAAATCC TATCGATTTC GCAATCGTGG AAGCGATTTC GATAACTGAA
GACGGAATGA TTATCCCTAC TACTTCCGTA GGAAATTCTT CGATCTTTGT GAAAAAAGCC
CGACACGTTA TTGTCGAATT GAACACAGCC CAACCAAAAG AACTAAAAGG ACTTCATGAC
ATTTACGAAG TCGGCAACCA GGGAAAACGC GAACCGATTC CTTTAACAAA AGTAGACGAT
CGAATCGGAA CAATTGGTAT TCCGGTAGAT GAAGATAAAA TTATTGGAAT CGTTTTGACA
AACCAACTTG ATTCTCCATC CACGATTGTG CCTCCAGATG CGGAAACAGC TGCTATAGCG
AACCATTTAA TCAATTTTCT ACGAAAGGAA GTCGCAGCAG GCCGACTTTC CGAAAATTTA
GCGCCGATTC AGGCAGGCAT TGGTTCTGTT GCGAACGCTG TCCTTTACGG TTTATTGGAT
TCGGAATTTT CTAATTTAGA AGTTTATTCA GAAGTTCTTC AAGATGCCAT GTTTGACCTC
ATTGATGCGG GAAAAGTCCG GTTCGCTTCC GGCTGCTCTA TTACTTTGTC TCAAAACAAA
ATGAAACAAG TGTATTCCAA TTTAGATGCT TACCGAGACA AGCTTATCCT TCGTCCTCAA
GAAATTTCTA ATCATCCAGA AATCGTTCGC CGTCTCGGGC TCATTTCCAT CAACACAGCC
TTGGAAGCAG ATATATACGG AAATGTTAAT TCTACACATG TTCGCGGCAC AAACATGATG
AACGGCATCG GCGGTTCAGG TGACTTTGCA CGCAATGCAC GCCTTACGAT CTTCGTGACA
AAATCCATTG CAAAAAATGG GGCTATTTCA AGCATCGTTC CATTCGTATC GCACGTTGAC
CATACCGAAC ATGACGTGGA TGTGATTATC ACGGAGTATG GTTACGCCGA TCTTCGCGGG
TTGGCGCCAA TCGAACGCGC ACCTCTTATC ATTGAAAATT GCGCACACCC GGATTACCGT
CCGCAGTTGC GTGAATACTT CAAGGAAGCG CTTAAGCGCG GAGGCCAAAC ACCGCACGTC
CTTGAAAAAG CGTTCTCTTG GCATATCCAT TATGAGAAAT ACGGAACAAT GTTAGAACCG
AAATATCAAC TGCAAACTCA ATGA
|
|---|
| Protein sequence | MDKQIFELIG NSRLRSRIVT AETAASWIKD GMTLGLSGFT RAGDAKAVPF ALIEKAKQQP
LKVNVYTGAS LGSDIDKTMA EAGIINKRLP FQADSVMRKK INQGEILFID QHLSHTAELV
RADVLNPIDF AIVEAISITE DGMIIPTTSV GNSSIFVKKA RHVIVELNTA QPKELKGLHD
IYEVGNQGKR EPIPLTKVDD RIGTIGIPVD EDKIIGIVLT NQLDSPSTIV PPDAETAAIA
NHLINFLRKE VAAGRLSENL APIQAGIGSV ANAVLYGLLD SEFSNLEVYS EVLQDAMFDL
IDAGKVRFAS GCSITLSQNK MKQVYSNLDA YRDKLILRPQ EISNHPEIVR RLGLISINTA
LEADIYGNVN STHVRGTNMM NGIGGSGDFA RNARLTIFVT KSIAKNGAIS SIVPFVSHVD
HTEHDVDVII TEYGYADLRG LAPIERAPLI IENCAHPDYR PQLREYFKEA LKRGGQTPHV
LEKAFSWHIH YEKYGTMLEP KYQLQTQ
|
|---|
| |