| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3465 |
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| Symbol | trmE |
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| ID | 2686588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 3810131 |
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| End bp | 3811501 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637128160 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | NP_954505 |
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| Protein GI | 39998554 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGTGG AAGATACCAT AGCCGCCATC AGCACGGCGG CAGGGGAGGG TGGGGTCGGG
ATCGTCCGCG TTAGCGGACC GGACGCCCCC TCGATTGCCC GCCGCGTTTT CAGGCGCGGT
TCCAACGGTG ACTTCGAAAG TCACCGTTTT TATTATGGGT CGGTTGTTGA TGCTGTCACT
GGCGAGGCCG TGGACGAGGC AATGGCGGTC CTCATGGTAC GCCCACGGTC CTACACCCGT
GAAGACGTCC TGGAGATCCA GTGCCACGGG GGATATCTCG TCACCCGACG CGTCCTGGAA
CTCGTGCTTG CCGCCGGGGC GCGTCTCGCA GAACCCGGTG AGTTTACCCG TCGAGCCTTT
CTCAATGGCC GCATCGATCT GGTTCAGGCA GAGGCTGTCA TCGACGTGAT CAGGGCCAAG
ACCGACGCTG CCCTTGCCTT GGCTCAGCAC CAGCGCCAGG GTCGGCTATC CCAACGGCTC
GACACGGTTA TGGCCGAGTT GCGTCAGGCT CTAGCACTGG TAGAAGCGTT CATCGACTTT
CCCGAAGACG ACATCGACCC AGCTGCTCAG GATGCATTAA CGGTCCATGT GAGGAAAGCC
GCCGAAACGG TTGGAGAACT AATTGCCGGA TTTGACGAGG GACGGGTCCT GCGAGAAGGG
GTGGCTGTCC TTATCGCAGG CAAACCGAAC GTGGGAAAGT CTAGTCTTCT GAATACCCTT
CTTCAGGAAA AGCGGGCCAT CGTCACCTCG GTACCCGGCA CCACCCGAGA CATTATCGAG
GAGGTGGTCA ATATCCGCGG TCTGCCGCTC CGGATGATCG ATACCGCCGG TATTCGCGAC
ACTGAAGACA TTGTGGAAAA AGAAGGGGTC CGCCTCACCC TTGAAAAGAT CCCCGAGGCG
GATCTGGTAC TGCTGGTGAT CGACGGTTCG CGACCTCTTG ATGAGGACGA CCGGATGATC
CTTTCTGCCC TTGCCGGCAA GCGACTCATT CTCGTGGAGA ACAAATGCGA TCTGCCGCGG
GCCGTGCAGA TTCCCGATGA ACTTGTCCTG ATGCCTAGGG TCACGGTTTC CACCTCGCGA
GGCGACGGCA TTGATGAGCT GAAGGAGTCA ATTTTCCAGA CCTTTATTCA CGGAGCTGCT
ATTGACAGTC GTGAGTATGT TGCTGTCTCC CGGGTTCGTC ACCGCGATCT GCTGTCCCGT
TCAACGATGC ACTTGACCGC GTTCGAGCAG GGACTTGCGT CGGGGTTCAC TCTTGAGTTG
CTGGCTGTTG AGTTGCGCGA CGCTCTGGCC GCTGTCGGTG AGGTCACGGG TGAGACAACC
CCGGACGACA TCCTGGACGT CATTTTTGAC CGATTCTGCA TTGGCAAGTG A
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| Protein sequence | MYVEDTIAAI STAAGEGGVG IVRVSGPDAP SIARRVFRRG SNGDFESHRF YYGSVVDAVT
GEAVDEAMAV LMVRPRSYTR EDVLEIQCHG GYLVTRRVLE LVLAAGARLA EPGEFTRRAF
LNGRIDLVQA EAVIDVIRAK TDAALALAQH QRQGRLSQRL DTVMAELRQA LALVEAFIDF
PEDDIDPAAQ DALTVHVRKA AETVGELIAG FDEGRVLREG VAVLIAGKPN VGKSSLLNTL
LQEKRAIVTS VPGTTRDIIE EVVNIRGLPL RMIDTAGIRD TEDIVEKEGV RLTLEKIPEA
DLVLLVIDGS RPLDEDDRMI LSALAGKRLI LVENKCDLPR AVQIPDELVL MPRVTVSTSR
GDGIDELKES IFQTFIHGAA IDSREYVAVS RVRHRDLLSR STMHLTAFEQ GLASGFTLEL
LAVELRDALA AVGEVTGETT PDDILDVIFD RFCIGK
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