Gene GSU3277 details

Gene Information

• Locus tag: GSU3277
• ID: 2688670
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 3594416
• End bp: 3595123
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637127969
• Product: lysM domain-containing protein
• Protein accession: NP_954317
• Protein GI: 39998366

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.914808
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAGCG CACTCAGGGT TGTTTCCGCC TCCCTCGTCC TCTCCATGGC CTCCCTGGCG 
GCCGGCGGGG AATACCTTCT CTATACGCCC GGGGCTTCGG AAGGGAGCCG TCCTTCGGGC 
CCGGACGAGG GAGTGCTCGT CAAGAGCATT ACCGTCCAGA AGGGGGATAC CCTGTATTCC 
CTCTCCCGCA AGTACAACGG TAAGGGCGGG TACTACCCCC AGATACTTCT CTTCAACGAA 
ATCAAGAACC CCGACCTTAT CTACGCCGGC AATAAACTCA TGGTGCCGGT GGCCCCGGCC 
GGTCCGAAAG CGGTGTTCAG CCAACAGCCC TCCGCTGTTC CGGCCGCCGC GGCAAAAAGA 
GAGTCAGCCG TTCGCCCCGC CCGGGAGAAG GTTGCGCCGG TCGCGGCCCA CCGGGAGGCA 
AAGCGGGAGT CCACTGTGAC CACATCCGTG CGGACGCCGG AACCAGCGGC CGCCACCCCC 
CCCGTGCCTT CGCGGCCTGC GGCGGAAGCG CACCGACCTC AAACGGGAAA GGCGGATGAT 
AACGAGCACT CTCTCTACGA GAAAGGAGTG AGCGCATACA AGTCAGGAGC CTATTCGCAG 
TCCGTTGAGC TGTTCGAGCG CTTCCTGGCC CGTTATCCGT CCTCTCCACT GGTCCCCGAT 
GCAACGCTCT ATCGTGCGGA TGCCTTCCTC AAGATGGCCG GTCAGTAA 

 

Protein sequence

MKSALRVVSA SLVLSMASLA AGGEYLLYTP GASEGSRPSG PDEGVLVKSI TVQKGDTLYS 
LSRKYNGKGG YYPQILLFNE IKNPDLIYAG NKLMVPVAPA GPKAVFSQQP SAVPAAAAKR 
ESAVRPAREK VAPVAAHREA KRESTVTTSV RTPEPAAATP PVPSRPAAEA HRPQTGKADD 
NEHSLYEKGV SAYKSGAYSQ SVELFERFLA RYPSSPLVPD ATLYRADAFL KMAGQ