Gene GSU3019 details

Gene Information

• Locus tag: GSU3019
• ID: 2686819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 3312678
• End bp: 3314636
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637127712
• Product: dehydrogenase, E1 component, alpha and beta subunits
• Protein accession: NP_954061
• Protein GI: 39998110
• COG category: [C] Energy production and conversion
• COG ID: [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit; [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAGC GCAAGATCGA TATGCTCATG AAAGACTGCT ATGAGCTGAC TGTCACTGCC 
CTCACAATCA GAAAAGTTGA AGAACGTCTA TTGGAGCTCT TTTCTGAAGG AGTACTCAAC 
GGAACAATCC ACACCTGTAT CGGACAGGAG TGGACCGGAG TGGCGGTTGC AAACGCACTG 
CAAGCGGGAG ATACAGTTTT CTCCAATCAC CGCGGTCATG GACATTATAT TGCCCTGACT 
GGTGATGTTT ATGGACTTAT CGCAGAAATC ATGGGCAAAG ACGACGGTGT CTGCGGAGGC 
GTTGGAGGTA GCCAGCATCT ACATACAGAA AACTTCTTCT CTAACGGGAT TCAAGGCGGA 
ATGGTGCCGG TCGCGGCTGG AAGAGCCTTG GCAAACGCGC TTCAAGGCAA CAATGCAATT 
TCAGTGGTTT TTATCGGAGA TGGAACTCTT GGAGAAGGTG TTATCTATGA AACGTTTAAC 
ATCGCATCCA AATGGCAGTT GCCACTGTTA GTTGTCCTGG AAAACAATCA GTACGCTCAG 
TCCACACCCA CATCCCTGAC ATTGGCAGGC AATATACGGG ACCGCGTACG TGGCTTCGGC 
ATAGAATATA TCAAGTGTGA CACATGGGAC ATCGCCGGGC TGCTTGACTC TGCAAAAGAG 
GCCGTTGATT GCGTACGCAA GAACCAAAAG CCTGTATTGC TCGAAATTGA TACATACCGG 
CTGAAAGCCC ACTCGAAGGG AGATGATCTT AGAGACCCTG TAGAGATCAG CCGCTACGCT 
GGGCAGGACA GCATAAATGC TCTACTGGAA TCTGACGTTC CAAGAGTCGC TGAAACCGTC 
AATCAAATCG ACAGCAATAT CCAACAGGCA ATCACCAAAG CCAGGGAAGC GACATTATGT 
TCTTTCGCTC CGGCATCGAA CAGTGTTCGA CAGTATCAAT CAGTTACGTG GAGAACTGAA 
TCCTTTGCCA GACAAAGAAT AATCACCTCA ATCAATTTAT CATTGCAATC GCTTCTGGAA 
AACAACTCTA AGGCAGTAAT TATCGGGGAG GACATTGAAG CCCCCTACGG AGGAGCTTTC 
AAAGCCACAA AGGATCTGAG TACGTTGTTC CCGGGAAGAG TCAAGAACAC CCCCATCAGC 
GAGGGAGCGA TTACAGGCGT AGGCATCGGT CTGGCACTGA GCGGATTTCT TCCCGTTGTG 
GAGATAATGT TCGGCGACTT CATGACTCTA ACCTTTGACC AACTGCTTCA ACACGCCGGT 
AAATTCTGTG AGATGTATGG CAAGGATCTC GACGTACCCT TGATCATTCG CACTCCCATG 
GGCGGACGTC GGGGTTATGG CCCAACACAC AGCCAATCTT TGGAGAAATT TTTTCTCGGC 
ATACCGAATC TGGAGGTCAT TGCGTACAAC CATAGAGTTT CTCCCGCCCT GATCTTTGGA 
AATCTGTGCA AGACGATCCG CAGGCCAACT CTCATCATCG AAAACAAGGT CCTCTATACT 
CAGCACGTAG ACAGTACTCC CATGCCTGGA TTCCGCATCA ATATTTCCGA CGAACTATTC 
CCAACCGTCA GAATATCGCC AAGTACCGGA GATCCGCAAG TGACGCTTGT CTGTTACGGG 
GGAATGCTTG CGGAGGTTGA GATAGCCGCA GCCGCGGCTT TCGACGAAAA CGAAATACTC 
TGCGAGATCA TATGTCCGAG CATTATCAAT CCTCTCAATG CATACCCCAT TCTTGAGTCG 
GCACGGAAAA CCAGGAGGCT GATAACCGTA GAAGAAGGAC CGAGCATAGC CGCCCTGGGC 
AGCGAGGTAG CCGCCCGAAT ACTTGAACAT TCGCTTCCCA TTGCCCATTA CAGTCGTATC 
GGTTACGACT CTACCATTCC ATCATCAGCC AGCCGTGAAT CCAGATTGAT AACAAATGCC 
GAATCAATCT TTGAACGTAT TGTGGAGATT TTCAAATGA 

 

Protein sequence

MNKRKIDMLM KDCYELTVTA LTIRKVEERL LELFSEGVLN GTIHTCIGQE WTGVAVANAL 
QAGDTVFSNH RGHGHYIALT GDVYGLIAEI MGKDDGVCGG VGGSQHLHTE NFFSNGIQGG 
MVPVAAGRAL ANALQGNNAI SVVFIGDGTL GEGVIYETFN IASKWQLPLL VVLENNQYAQ 
STPTSLTLAG NIRDRVRGFG IEYIKCDTWD IAGLLDSAKE AVDCVRKNQK PVLLEIDTYR 
LKAHSKGDDL RDPVEISRYA GQDSINALLE SDVPRVAETV NQIDSNIQQA ITKAREATLC 
SFAPASNSVR QYQSVTWRTE SFARQRIITS INLSLQSLLE NNSKAVIIGE DIEAPYGGAF 
KATKDLSTLF PGRVKNTPIS EGAITGVGIG LALSGFLPVV EIMFGDFMTL TFDQLLQHAG 
KFCEMYGKDL DVPLIIRTPM GGRRGYGPTH SQSLEKFFLG IPNLEVIAYN HRVSPALIFG 
NLCKTIRRPT LIIENKVLYT QHVDSTPMPG FRINISDELF PTVRISPSTG DPQVTLVCYG 
GMLAEVEIAA AAAFDENEIL CEIICPSIIN PLNAYPILES ARKTRRLITV EEGPSIAALG 
SEVAARILEH SLPIAHYSRI GYDSTIPSSA SRESRLITNA ESIFERIVEI FK