| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2990 |
|---|
| Symbol | cobD |
|---|
| ID | 2685844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 3281715 |
|---|
| End bp | 3282677 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637127683 |
|---|
| Product | cobalamin biosynthesis protein CobD |
|---|
| Protein accession | NP_954032 |
|---|
| Protein GI | 39998081 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
|---|
| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.168567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGCC CTGACCGGGT GGCCCTGCTG GTCCTTGCCG CCCTTGTTCT CGACTGGCTG
CTGGGCGATC CTCGCTGGCT CCCCCATCCG GTGGTGGCCG TGGGCAGGCT TGTGACCGCC
CTTGAACGGC AACTCCGCCG CCTGGTGACG AACGAGCGAG CAGCAGGTGT GATTCTGCTG
GTTCTGACCG TCGGGATCAC CGGGGGCACC GCCTGGCTGC TCGTTCTGGG CGCCGGACTG
GTGCACCCCG TGGCCGGGTT CGCGGTAGAG GCGCTGTTGG GCTGGACCTG TCTGGCTGCC
CGCTCGCTCC ACGGGGAGTC GAAGCTCGTG GCGGATGCCT TGGCCGCCGG CGATCTCGCC
GAGGCGCGCT TTTTCCTTTC CCGCATCGTA GGGCGCGATA CCGCGGAACT CACCGAGCCG
GAGATCTGGC GCGGCGTCGT GGAGACCGTG GCCGAAAACA CCTCCGACGG CGTGATCGCC
CCCCTGTTCT GGTTCATGAT CGGCGGGGCC CCGCTGGCGC TCGCCTACAA GGCGGTAAAC
ACTCTCGATT CCATGGTCGG GTACAAAAAC GAGCGGTATC TTCATTTCGG CTGGGCTTCG
GCACGGTTCG ACGATCTGGT GAACCTGCTG CCGGCCAGGA TCACCGGCCT GCTCATGGTG
CTGTCCGCCC CGCTGGCGGG ACTTTCCGGG CCGGGCGCCT GGCGGATCAT GCGCCGGGAC
GGCCGCAACC ATTCCTCCCC CAACGCCGGC ATCCCCGAGG CTGCCGCGGC CGGAGCCCTT
GGGGTGCGCC TCGGCGGCAT GAATGTCTAC TTTGGCCGGC CGGTGGCGAA ACCGACCATC
GGCGATCCCC TGAACCCTCT CGATCGCACG GCATGGCGCG GCGCCGTCCG GCTCATGTAC
GGCTCCGAGA TCCTGCTGAC GGGGTTCATG TTGTGCTACC TTTTTGTCCT GGAGCGTCCG
TGA
|
|---|
| Protein sequence | MTGPDRVALL VLAALVLDWL LGDPRWLPHP VVAVGRLVTA LERQLRRLVT NERAAGVILL
VLTVGITGGT AWLLVLGAGL VHPVAGFAVE ALLGWTCLAA RSLHGESKLV ADALAAGDLA
EARFFLSRIV GRDTAELTEP EIWRGVVETV AENTSDGVIA PLFWFMIGGA PLALAYKAVN
TLDSMVGYKN ERYLHFGWAS ARFDDLVNLL PARITGLLMV LSAPLAGLSG PGAWRIMRRD
GRNHSSPNAG IPEAAAAGAL GVRLGGMNVY FGRPVAKPTI GDPLNPLDRT AWRGAVRLMY
GSEILLTGFM LCYLFVLERP
|
|---|
| |