| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2588 |
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| Symbol | lpdA-2 |
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| ID | 2686338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 2851313 |
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| End bp | 2852671 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637127278 |
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| Product | alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase |
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| Protein accession | NP_953634 |
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| Protein GI | 39997683 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.896583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACGT TTGATGTTGT TGTTATCGGC GGCGGTCCCG GAGGCATGAC CGCAGGGATG
ATGCTGAAGC AGGCTGGCAA ATCGGTCGCG ATCATCCAGG AAAATCACGA CAGTTTCGGC
GGGGTCTGTC TCAACCGTGG CTGCATGCCG ACCAAATCCA TGCTAAAAGC GGCCAAGGTC
TATCGCGATG CCCAAAACAG CGAGAAATAC GGCCTGGACC TATCCGTGAA CCCTGTCGAT
TTAACACGCC TGCGCGCCGT TGCCGACGCA GATCTGAACA TGCTGCGTCA TATGGTCCAG
GGAAAACTGA CCGATGCGCG CATTGCCGTC TTCCGCGGCA AAGGCTCTTT CCTGTCCGAA
CATGAGCTAC AGATCTGCCA AGCAGATGGC AGTTCCGAAC AAATCCGCGG CGAAAAAATT
ATCATTGCGA CCGGTTCGGT CCCCGCCGAA CTTCCCTGTG CCCCCTTTGA TGGGCACTCC
ATCCTCTCCA GTGACCAGAT TCTGAAAAAC ACGGATCTCC CGCACAAGCT GCTGATTATC
GGCGGCGGGG CGATAGGCTG CGAGTTTGCA ACCCTGTACA ACACCTTCGG CAGCAGAGTT
ACCTTGGTTG AAGCCATGGA TAGCCTGCTG CCACGGGAAG ACAAGGAAGC CGGGAAAACG
CTGCAGTCCA CCTTTGAACA GCAGGGCATC ACGGTGAAAA CAGGCGCGGC CATCAAAAGC
ATTTCGGTCG AGGCTGGAAC GGTCCATGTC CATTATGACG GCTCCTGCGC AACCGAAGAA
TTCGACAAGG TACTGGTCGG CATCGGCCGC ACAGCGAACA TTGCCGGGCT GAACCTTGAC
GCTGCCGGAG TAGCGACCGA ACAGGGCGCT GTCAAGGTTA ACGAGATGAT GCAGACCACC
GTTCCCCACA TCTACGCGCT GGGCGACGTG ATCGGTGGCA TGACCCTGGC CCATGCGGCA
GAAAAAGAAG GGTACCTGCT TGCCCAGAAT CTTATTCAGG GCACTCGCCA CCCCCTCGAC
CATCGTGCTG TCCCGCGAGT TGTGTTCTGT CACCCCGAAG TGGCGGCAGT AGGAACACAT
GAAGCCAGGG CCGGCATTAA GGCCTTCACC ATGCCACAGG CCCCCAATGG CCGCGCCGTG
GTGGACAAAG TCGCGCCGGC CTTCGTGAAG CTGTTTATCG AGGAGGATAC CTCTCAAATC
GCCGGGGCAA TCATCATCGG AGAAGGGGCA ACAGAAATGA TCCACGAGAT GGCAGTGGCG
GTCGAAAACC GTCTGACCCT GGAGCAGATA GGGAAAACGG TCCATGCCCA TCCGACTCAT
TCCAAAAATG TTCTGCTAGC CGTCCAGCAC TTCAATTAA
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| Protein sequence | MQTFDVVVIG GGPGGMTAGM MLKQAGKSVA IIQENHDSFG GVCLNRGCMP TKSMLKAAKV
YRDAQNSEKY GLDLSVNPVD LTRLRAVADA DLNMLRHMVQ GKLTDARIAV FRGKGSFLSE
HELQICQADG SSEQIRGEKI IIATGSVPAE LPCAPFDGHS ILSSDQILKN TDLPHKLLII
GGGAIGCEFA TLYNTFGSRV TLVEAMDSLL PREDKEAGKT LQSTFEQQGI TVKTGAAIKS
ISVEAGTVHV HYDGSCATEE FDKVLVGIGR TANIAGLNLD AAGVATEQGA VKVNEMMQTT
VPHIYALGDV IGGMTLAHAA EKEGYLLAQN LIQGTRHPLD HRAVPRVVFC HPEVAAVGTH
EARAGIKAFT MPQAPNGRAV VDKVAPAFVK LFIEEDTSQI AGAIIIGEGA TEMIHEMAVA
VENRLTLEQI GKTVHAHPTH SKNVLLAVQH FN
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