| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2475 |
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| Symbol | |
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| ID | 2687863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 2712307 |
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| End bp | 2715018 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637127165 |
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| Product | sigma-54 dependent transcriptional regulator |
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| Protein accession | NP_953521 |
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| Protein GI | 39997570 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.198348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTCTCG TCTCCGGCCA GGACCGGATC CGCATCTACC TGGAAGACCT GACCCGCGGC
GTCCTTACCT GTGTCCACGC CTCGGGCCCC CTGGCCGATG AGATCCGCGA GGTGAGCTTC
CCCATCATCT CCCGTGAGGC GTCGGTTTCC AGCGTCTTTG TCTCCCAGTA CGCCACCGAA
TTCCACTACG AGCCGGAGGG AAAACACACC TTCGACCGGG GCTTTGCCGA ACGCTTCGCC
ATCGGCCACA GCTACATCCT GCCGGTGGTG AGCCAGGGGA AATCCATCGG CGTGGTCTGC
GTCGACCGCT TCCGGCCGGG GGAGATCCTG CGCGGCAAGG GGAAGGCGCT GCTGGGCGAG
TTCGTCACCT CCGTGGCCGA CCGGCTCGAC GTCGCCCGCA TCTACCACCA GCAGCTCCTG
CTCGCCCGCC GGGTCGAGGA GTACAAGAAA CGGGAAGCTG CCTCGTTCAT GGTGCAGTCG
GCCGTGCGCC TCATCGACCG GCTGGTCCTC GCCTCGGTGC TGGTGCCCGT GCCCGGTCCG
GAAGGCTCGT CGCGCCTCGC CATCCTGGCC AGCCACTCGG AAGACCCCAG CCTGAAAAAG
CAGTATGACG AGCAGGGAGA GATCGCTCTC CAGAGGGGTA CCTCCCTCAT CTCCCGGTTC
CTGGACGACA ACGCGGTCAT CGCCGACGAA CGGCTTCTGC GCCCGCTGTT CATTCCGGAC
CTGACCCAGC AGGAGCTCCA GAAAAAGGCC CTCACCGAGA AGATGGCGCT GCGCTCCCTC
TACGTGGTGC CCCGCTACGA GCCGTCCAGC CGCAAGGTCA TCTGCCTGGT CAACTATTTC
ACCAAAGACC TGTACCGCTT CTCCGACTTC GAGATGGGCC TGCTCCAGAC CCATGCGGAG
ATGGCGGAGC GGATGGTGAA CGAGATCGGC GGCGAACACT TGGAAATCCG CGTCCTGGCC
GAGATCACCG AACTCCTCCA GGAGCGCAAC GAAGAGCTTT CCCCGTTCCT CACCCGGGTC
CTGTCAATGG CCACGGAGCT GATCGGCGCC GATACCGGCA GCATCGCCAT CGTCCAGGAG
CGTGACGGCG AAAAATGGCT TGTGGTGGAG GACGAAGAAG GGACCATCGT CGGGGCCAAG
AACAAGTCGT GGCTCAAGAA GTACATCCCC CCCTTCAGAA TCGGCGGCCA CGAGCTCCCC
GCCGAGGAGC GGAGCCTCAC CGGCTACGTG GCCTGGTCCA AGCAGCCGAA GATCATCGCC
CACGTGGCGG ACGAGCAGGG GGGCGAGGGG TTCCACCGCT CCATGCACGA GCTGATCAAG
AGCGAGATCG CGGTCCCCAT CGTCTGCGAC GACGAGGTGA TCGCCGTGGT CTGCCTCAAC
TCGCTCAAGC CCGCCTGGTT CACGGAAGAG CACAAGCGGA TCCTGCAGAT CATCGACCGG
CTCACCTCCC GGCACATCTC CGACGTCCAG CGGATCGAGC GGCTCGAGGG GGAGGTGACC
CGGCTCAAGA CTGACGTGGC CTACAAAGAC CCCCAGATCT CCTCCTACCG GCTCGGCAAC
ATCATCGGCA ACAGCCGCAA AGCCCAGGAG ATCGTTGATT TCATCAACAC CGTGTCGGTG
CCCCTCTTCA ACCGGATCAC CCTCTGGAGC AAGAACGTCC TCCAGGAGGC GACCATCGGC
CTCCCCTCCA TCCTCGTCCA GGGGCAGACC GGCGCCGGCA AGGAGTTCTT CTTCAACAAC
CTCTACAACA AGCTGAACGA GATGTACCGG GAGAAGCTCA ACCCCGCTGG CCAGCTCCCC
GTGAAAAAGA CCAACATCGC GGCCTACAGC GGTGACCTGA CCTACTCGGA ACTCTTCGGC
CACAAGAAGG GGGCCTTCAC CGGCGCCTAC AGCGACCGCA AGGGCATCCT GGAGGATGCC
GCCGGCGGGA TCGTCTTCCT GGACGAGATC GGCGACGCCG ACCCCAAGAC CCAGGTGCAG
CTGCTCCGGT TCCTGGACAA CGGCGGGTTT GTGCGGCTGG GGGAAAACCA GGACCGTTTC
AGCCGGGTGC TCCTGGTGGC CGCCACCAAC AAGGATCTGG CGGAAGAGAT CCGCAAGGGG
AACTTCCGGG AAGACCTCTA CCACCGGCTG TCGGAGCTGG CGGTGCAGGT GCCGTCCCTG
AACGAGCGGC GCGAGGACAT CCCCGACCTG GCCACCCACT TCCTGGGCAA GCTCTACCGC
ACCTACCGGG GGGACGAGTC CAAGGACGCC GCCCCCACCC TGGCGGAGGA GGCCAAGCGG
CTCCTGATGA ACCACCACTA CCACGGCAAC ATCAGGGAAC TGCGGAGCAT CCTGCTGCGG
GCGCTCTTCT TCCGCAAGGG CACGGTGCTC ACCGCCGACG ACGTCCGGCG CGCCCTGGCC
GCGGGCATGC GCGAGTTCGC CCCTGCCACC GCCACCCAGG AGCTGAACGA CCGGATGGTG
ACGGAAATCC TGGACAAGAT CGCCAATGGC GAAACCTTCT GGGAAGCGGT CTACGAGCCC
TACTCCCGCA ACGCCATCCC CCGCGACGCC GTCCGGCTCG TCATCGAGCG GAGCCGCGAC
GCGGCGGGCC GGAGCATGCC CCAGGTGGCC CGCTACCTCA AGGCCGTGGG CGACGATGTG
GAAGAAAACG ACGAGGAGCG GAAGCGGTTC TTCAAGTTCA AGAATTTCCT CTATAAGACC
GTGAAGATCT GA
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| Protein sequence | MRLVSGQDRI RIYLEDLTRG VLTCVHASGP LADEIREVSF PIISREASVS SVFVSQYATE
FHYEPEGKHT FDRGFAERFA IGHSYILPVV SQGKSIGVVC VDRFRPGEIL RGKGKALLGE
FVTSVADRLD VARIYHQQLL LARRVEEYKK REAASFMVQS AVRLIDRLVL ASVLVPVPGP
EGSSRLAILA SHSEDPSLKK QYDEQGEIAL QRGTSLISRF LDDNAVIADE RLLRPLFIPD
LTQQELQKKA LTEKMALRSL YVVPRYEPSS RKVICLVNYF TKDLYRFSDF EMGLLQTHAE
MAERMVNEIG GEHLEIRVLA EITELLQERN EELSPFLTRV LSMATELIGA DTGSIAIVQE
RDGEKWLVVE DEEGTIVGAK NKSWLKKYIP PFRIGGHELP AEERSLTGYV AWSKQPKIIA
HVADEQGGEG FHRSMHELIK SEIAVPIVCD DEVIAVVCLN SLKPAWFTEE HKRILQIIDR
LTSRHISDVQ RIERLEGEVT RLKTDVAYKD PQISSYRLGN IIGNSRKAQE IVDFINTVSV
PLFNRITLWS KNVLQEATIG LPSILVQGQT GAGKEFFFNN LYNKLNEMYR EKLNPAGQLP
VKKTNIAAYS GDLTYSELFG HKKGAFTGAY SDRKGILEDA AGGIVFLDEI GDADPKTQVQ
LLRFLDNGGF VRLGENQDRF SRVLLVAATN KDLAEEIRKG NFREDLYHRL SELAVQVPSL
NERREDIPDL ATHFLGKLYR TYRGDESKDA APTLAEEAKR LLMNHHYHGN IRELRSILLR
ALFFRKGTVL TADDVRRALA AGMREFAPAT ATQELNDRMV TEILDKIANG ETFWEAVYEP
YSRNAIPRDA VRLVIERSRD AAGRSMPQVA RYLKAVGDDV EENDEERKRF FKFKNFLYKT
VKI
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