Gene GSU2025 details

Gene Information

• Locus tag: GSU2025
• Symbol: aroB
• ID: 2686097
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 2217113
• End bp: 2218201
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637126716
• Product: 3-dehydroquinate synthase
• Protein accession: NP_953074
• Protein GI: 39997123
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0337] 3-dehydroquinate synthetase
• TIGRFAM ID: [TIGR01357] 3-dehydroquinate synthase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCATCG AGACACTGAG AGTAGAACTC GGTGAACGGA GCTACGATAT TCGCGTCGGC 
TCGGCGATCA TCGGCACGAT CGGCGCCGTG TGTCGTGACG CTGTGGCCGG CAGGCGCGTG 
GCCGTTGTGA CCAATACCAC CGTTGGTCCC CTCTATGCGG ACGGTGTTGT TGATTCGTTG 
ACCGCCGCCG GTTTTACCGT GCTTCGCATT GATATCCCCG ATGGAGAAGA GCATAAAACT 
TCTGTCACCC TCACTAGTGT CTATGACGAA CTCATCAAAG GCGGATTGAC GCGGGACTCT 
CTTCTTGTTG CCCTTGGCGG AGGGGTGGTT GGAGACCTGG CCGGTTATGC CGCTGCCACG 
TATCTGCGCG GTGTTCCCTT CGTGCAGGTC CCGACCACGC TCCTCGCTCA GGTGGATAGC 
AGCGTGGGCG GCAAGACCGG CATCAACCAT CCACTGGGCA AGAATCTGAT CGGCGCGTTC 
CATCAGCCCA GAGCGGTTCT CATTGACGTG GACACCCTTG CAACTCTCCC CCAGCGTGAG 
TATCTCGGCG GCCTTGCCGA AGTCATCAAA TATGGCGTGG TGCTCGACGG AAAGTTCTTC 
GCGTTTCTCG AACAGAATGT GAGCGCTCTT CTCGGGCGAG ACCGGCAGAC GTTGGTCCGT 
GCCATTACGC GTTGCTGTGC GCTGAAGGCC TGGGTCGTGG AGCAGGATGA ACGCGAGACC 
GGACTTCGGG CGGTCCTCAA CTACGGGCAC ACGTTCGGCC ACGCCGTGGA GGCGCTGACG 
GGCTACACTG CCGTTCTCCA CGGGGAGGCG GTCGCCATTG GCATGGTCCG GGCCGCTGTC 
CTGGCAGAGG CCCGGGGGCA CTCTTCGGCC GGAGATACCC GACGGATTCG CGCACTTGTG 
GAGGCCTTGG GGCTGCCGAC CGAACTCCCG TCGTTTGATG CAGACAGCTA CCGGGATGTA 
CTTCTGCGCG ATAAGAAGGC TCGGGATCGC GGGCTGGACT TCGTACTCAA CCGGGGAATA 
GGCGGCCATG AGATCGTCAG GATCGAAAAC CTGTCTGAAG TATTCGGCAT CTGCGGCGTG 
GGGGAATGA 

 

Protein sequence

MTIETLRVEL GERSYDIRVG SAIIGTIGAV CRDAVAGRRV AVVTNTTVGP LYADGVVDSL 
TAAGFTVLRI DIPDGEEHKT SVTLTSVYDE LIKGGLTRDS LLVALGGGVV GDLAGYAAAT 
YLRGVPFVQV PTTLLAQVDS SVGGKTGINH PLGKNLIGAF HQPRAVLIDV DTLATLPQRE 
YLGGLAEVIK YGVVLDGKFF AFLEQNVSAL LGRDRQTLVR AITRCCALKA WVVEQDERET 
GLRAVLNYGH TFGHAVEALT GYTAVLHGEA VAIGMVRAAV LAEARGHSSA GDTRRIRALV 
EALGLPTELP SFDADSYRDV LLRDKKARDR GLDFVLNRGI GGHEIVRIEN LSEVFGICGV 
GE