Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1963 |
Symbol | |
ID | 2688224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2151750 |
End bp | 2153306 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637126654 |
Product | polysaccharide biosynthesis domain-containing protein |
Protein accession | NP_953012 |
Protein GI | 39997061 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.876605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCCTGG GTCGCCAGAT ATTCAAACAT ACCGCCATCT ACAGTGCGGC GACCATAGTC GGAAAGCTTG CCAGCTTCCT GATGCTGCCC TTCTATGCGC ACATCTTCCA GACAAAGGGA TACGGCGTTA TCGGCATGAT CGATGCCAGC CTCGGCATCC TGACGGTCCT GTTCACCGGC GGCTTCCAGA TGGCCATCCT GCGCATCTAC CACGAGCAGG AGGTCCATCG CAAGGAACTG GCCCTCGGCA CCGGAGTTCG CCTGGTGTGG GGCTTGAGCG CCTTGACCGT AGTGCTGCCC ATCCTCTTCA GCTCACCCAT CAGCCGGTTC GCCCTGGGCA GTGCCGAGTA CTACCCCCTT GTCTGTCTCG CGCTGGTAAC GTTCGTCATC GACGTGGCCG GTCAGAGTGC CAGTACCTTT CTGATTATCC GGCAGAAATC GCTGCTCTTT TCCGCGGTCG GTCTCGTGCG TCTCTTTCTT GGCCTCTCCC TCAACATCTG GCTGGTGGTC ATCCTTCAGG TCGGTCTTAT CGGGGTATTC ATCTCTTCCC TGGTGTCCGC CGCCGTGAGC ACTCTGATAT TCCATGTGGT GGCCCTGAGA GACCACGGTT TCGGCTTTGA CCGACAGATT GCCGGGAGCC TGCTCAGGTT CCAATTACCC CTGCTTCCCG GTGAACTGGT CGGTTTTCTC GGGCGTCAGG CCGAGCGGGT TCTGGTCCGG TTTCTGATCG GACTCGAAGG GATGGGCGTC CTGGAGATGG CTTATAAGTT CGCGCCGTTG CTGAACCTGC TGATCAATAT CCCCTTTGGC AGAAGCTGGC GCACCAAGAG CATCGAAATC GCCGAGCAGG AAGACGCGCC CCGTGTCATG GGCGAGATGT TTACCCGCTA CCTGTTCTTC ATGATTTTTG CCGGGCTCGT CCTGGCCGTG GTCATGCAGG ACATTCTGGA ACTGATGACA CCTCAGTCGT TCTGGTCAGC CAAGCGGATC GCCCAGGTGG AAATCGTCAC CACCATCCTC ACGGGATGTA CCACGTTCCT GTCGTTCGGA ATCCTCTACC GCAAGGAAAC CAAGGTTTTT ACCTATGTTA AGTCGGTGCT CACCCCGGTC AAGATAGCTC TCGCCTTTAC GCTGATCTCC CTGTGGGGGT TGTCGGGCGC GGCCTATTCG GCGCTGATCA TCGAAGCGGT CACCCTAGTA TGGATATTCC ATAGATCCCA GTGTCTTTAC CGAATTCCCC TTGAATACCG CCGTATTGGG GTCATGGTGG GCGGAGCCGT CATTATCTTT GCTCTGCTGG ACGGCAACCG CTATGAGCAT TTCGGTCCGG CGGTCTATGC CCGGGAATAC CTGCTGCCCG GAGTGACCGG CTTTCTGCAG GGCACCCCTC TGGGAGAGTG GAAATCCGGC AAACTGATCC ACTTGTTCAG GATGAAGGAG GGGCTGGTGG TTTCGCTCTT CTTCAACATG CTCGCATCCA TGATGTTTCT GGCCGTTATT CCCCTCCTGA GAGGGAAAAA GCTGCTGCCT GGCCAGCATG AGGTCAATAA TGCCTAA
|
Protein sequence | MGLGRQIFKH TAIYSAATIV GKLASFLMLP FYAHIFQTKG YGVIGMIDAS LGILTVLFTG GFQMAILRIY HEQEVHRKEL ALGTGVRLVW GLSALTVVLP ILFSSPISRF ALGSAEYYPL VCLALVTFVI DVAGQSASTF LIIRQKSLLF SAVGLVRLFL GLSLNIWLVV ILQVGLIGVF ISSLVSAAVS TLIFHVVALR DHGFGFDRQI AGSLLRFQLP LLPGELVGFL GRQAERVLVR FLIGLEGMGV LEMAYKFAPL LNLLINIPFG RSWRTKSIEI AEQEDAPRVM GEMFTRYLFF MIFAGLVLAV VMQDILELMT PQSFWSAKRI AQVEIVTTIL TGCTTFLSFG ILYRKETKVF TYVKSVLTPV KIALAFTLIS LWGLSGAAYS ALIIEAVTLV WIFHRSQCLY RIPLEYRRIG VMVGGAVIIF ALLDGNRYEH FGPAVYAREY LLPGVTGFLQ GTPLGEWKSG KLIHLFRMKE GLVVSLFFNM LASMMFLAVI PLLRGKKLLP GQHEVNNA
|
| |