| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1313 |
|---|
| Symbol | |
|---|
| ID | 2688072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 1439519 |
|---|
| End bp | 1439851 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637125987 |
|---|
| Product | carboxymuconolactone decarboxylase |
|---|
| Protein accession | NP_952366 |
|---|
| Protein GI | 39996415 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCGT ACTATGTACC CGACGATCTG GCGAAGTTCG GCGACATCGG CAAGGATGCG
CCGGACTTGG CCAAGAAGTT CTTTGATTAC TACGGCGCAG TGTTCGCCGA GGGAGAGCTG
ACCGAGCGGG AAAAGACCCT CATCGCCCTG GCCGTTGCCC ACGCGGTCCA GTGCCCCTAC
TGCATCGACG CCTATACCCG GGCCTGCCTG GAGAAGGGAT CGAATCTGGG CGAGATGACC
GAAGCGGTCC ACGTGGCCAA CGCCATCAGG GGCGGCGCGG CCCTGGTCCA CGGGGTGCAG
ATGCGTAAAA TCGCCGAGAA GCTGTCGCTG TAG
|
|---|
| Protein sequence | MDSYYVPDDL AKFGDIGKDA PDLAKKFFDY YGAVFAEGEL TEREKTLIAL AVAHAVQCPY
CIDAYTRACL EKGSNLGEMT EAVHVANAIR GGAALVHGVQ MRKIAEKLSL
|
|---|
| |