Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0800 |
Symbol | |
ID | 2685240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 857663 |
End bp | 858433 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637125472 |
Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
Protein accession | NP_951857 |
Protein GI | 39995906 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.38805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCTCTG CCCTGCTCGT TGCTTTTGCC GCAACCGCCT TCGCGGCCGA CGGTTCCTGG AACCGGGTCA AATCCGCCGG GAAACTTGTC ATCGGCCTCG ATGACGCCTT CCCCCCCATG GGATACCGCG ATGCCAGCGG CAAGCTGATC GGCTTCGACA TCGACGCCGC CGAAGAAGTG GGCAAGCGCC TGGGCATCAA GATCGAGTGG CAGCCCACCG CCTGGGACGG GGTCATCCAC TCCCTCAACT CCAAAAAATT CGATGCCATC TGGAACGGCA TGACTATCAC CGATGAGCGG GCCAAGCAGG TAGCCTTCAC CAAGCCCTAC ATCATGGACG GCCAGATCGC CGTGGTGAAG TTCTCCGAGA AGCGCTTCAA GAAGATCGCC GACCTGAAGA ACGTGAAAAT AGGCGCCCAG AAGGGCTCCT CGGCCCTCAA CGCCGTGAAG AAGCTCCCCA CCGCTCCGGC CGAGCTCAAG GAGTACGAGG ACAACCCCAA GGCGCTGCTG GATCTTGAAG CGGGCCGCAT CGACGTGGTG GTGATCGACA ACGTGACCGG CCGCGACTTC ATCGCCAAGC GTCCGGGCCA GTTCAAGGTG GTCCCCGGCT TCATCAGCAA GGAGCCCTTC GGCGTCGCCT TCCGCAAGGA AGACAAGGAA CTGCGTGAGA AGGTGCAGAA GACCCTGGAC AAGATGGTGA AGGACGGCTC CCTGGCGAAG ATCTCCCGCA AGTGGTTTGC AGAAGACATC ACCAACCCCA AGAAGTGGTA A
|
Protein sequence | MVSALLVAFA ATAFAADGSW NRVKSAGKLV IGLDDAFPPM GYRDASGKLI GFDIDAAEEV GKRLGIKIEW QPTAWDGVIH SLNSKKFDAI WNGMTITDER AKQVAFTKPY IMDGQIAVVK FSEKRFKKIA DLKNVKIGAQ KGSSALNAVK KLPTAPAELK EYEDNPKALL DLEAGRIDVV VIDNVTGRDF IAKRPGQFKV VPGFISKEPF GVAFRKEDKE LREKVQKTLD KMVKDGSLAK ISRKWFAEDI TNPKKW
|
| |