Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0460 |
Symbol | fabF-1 |
ID | 2686164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 490614 |
End bp | 491819 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637125126 |
Product | 3-oxoacyl-(acyl-carrier-protein) synthase II |
Protein accession | NP_951519 |
Protein GI | 39995568 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0842196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACAAAA CCCGCATCGC CATAACCGGT CTCGGCATCT TCTGCGCGGC CGGCAAAGAC CTGGCATCCT TCACCGACGC CCTGCTGCAC GGACGCTGCG GCATCGGTCC GGTGGATCTT TTCGACGTCT CTCCCTTCCC TTCCCACATC GGAGCCCAGG TGCGCGACTA CTCCCCCCTG GACTACTTTG ACCGGGCCGA CGCCCGGCGG CTTTCCCGCA CCGACCAGTT CGCCGCCGTT GCAGCCGCGG AGGCCCTCGG CATGAGCGGC GCAAGGGAAC ACTACGACCC CTTTACCGTG GGGATCTGCG TGGGGGCCGG TGCATCGGGG ATGATCCACG GCGAGGCCTG GCTCCGTGAC CGTCTTGCGG GCGGGAAGGG AAGGCCGGGC GACCTGCGTT GCATCCTGCC GGACCGGACC ACCACCGCCC TGGCGGAGCG CTTCGGCCTC TGGGGCTACC AGGGAAGCAT CACTACCGCC TGCTCCTCGT CGGCCACGGC TATCGGCTGG GGTGCCGACC TCATCGCCAC AGGTCAGCTC GACGCCTGCC TCTGCGGCGG AAGCGACACG CTCTCCATCC TCACCTATGC CGGATTCAAC TCTCTGCGGG TCGTCGATCC CGAGCCCTGC TCCCCCTTCA GCCTGGGCCG CCAGGGAATA TCCCTCGGCG AAGGGGCGGC CTTCGTGGTC CTGGAACGGG AGGAGACGGC ACGCAGCAGG GGCGCTCGCA TCTACGGCCG CGTTCTGGGC TATGCCTTGG CCGGCGAGGC CCATCACATG ACCGCACCGG AGCCATCCGG ATCGGAAGCG GCCCGGGTAA TGCGGGCCGC CCTCGACAAT GCAGGGGTTT CTGCCGGCGA AATCGGCTGG GTTAACGCCC ACGGCACCGG CACTCCCCTC AACGACGTGG TGGAAAGCAA GGCCATGAAA CTCGTGTTCG GCGCTGACGT GCAGCACGTC CCCCTGGTCT CCACCAAGGG GATGACCGGC CACTGCCTGG GCGCCGCCGG CTCCATCGAA ATCGTCGCCA CCGTAACGGC CCTGGGGGCA GGGATTATCC CCCGGACCCT CAACTTCCGG GGGAGCGATC CGGAGTGCGA CCTGGACTAC TGCCACGACG GCCCACGGGA GAGCTCGGCA ACCGTCGCCC TCTCCAATTC CTTTGCCTTT GGCGGCAACG TTACCTCGGT GGTGATCGGA CGATGA
|
Protein sequence | MDKTRIAITG LGIFCAAGKD LASFTDALLH GRCGIGPVDL FDVSPFPSHI GAQVRDYSPL DYFDRADARR LSRTDQFAAV AAAEALGMSG AREHYDPFTV GICVGAGASG MIHGEAWLRD RLAGGKGRPG DLRCILPDRT TTALAERFGL WGYQGSITTA CSSSATAIGW GADLIATGQL DACLCGGSDT LSILTYAGFN SLRVVDPEPC SPFSLGRQGI SLGEGAAFVV LEREETARSR GARIYGRVLG YALAGEAHHM TAPEPSGSEA ARVMRAALDN AGVSAGEIGW VNAHGTGTPL NDVVESKAMK LVFGADVQHV PLVSTKGMTG HCLGAAGSIE IVATVTALGA GIIPRTLNFR GSDPECDLDY CHDGPRESSA TVALSNSFAF GGNVTSVVIG R
|
| |