9 homologs were found in PanDaTox collection
for query gene GSU0406 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002939  GSU0406  TPR domain-containing protein  100 
 
 		 748 aa  1506    Geobacter sulfurreducens PCA  Bacteria  normal  0.754061  n/a   
 
 
-
 
NC_007517  Gmet_3116  tetratricopeptide TPR_4  58.42 
 
 		 700 aa  754    Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_4217  TPR repeat-containing protein  42.25 
 
 		 684 aa  497  1e-139  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_3422  TPR repeat-containing protein  40.55 
 
 		 713 aa  468  9.999999999999999e-131  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_3308  Tetratricopeptide domain protein  40.48 
 
 		 714 aa  458  1e-127  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_3926  Tetratricopeptide TPR_4  34.65 
 
 		 694 aa  336  9e-91  Geobacter sp. M21  Bacteria  n/a    normal  0.0916918 
 
 
-
 
NC_011146  Gbem_3842  TPR repeat-containing protein  34.26 
 
 		 702 aa  333  5e-90  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_1196  hypothetical protein  26.94 
 
 		 837 aa  70.1  0.0000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.500678  n/a   
 
 
-
 
NC_013223  Dret_0652  hypothetical protein  20.82 
 
 		 833 aa  48.5  0.0004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  0.326198 
 
 
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