| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0406 |
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| Symbol | |
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| ID | 2686531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 437013 |
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| End bp | 439259 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637125071 |
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| Product | TPR domain-containing protein |
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| Protein accession | NP_951465 |
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| Protein GI | 39995514 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.754061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGCTTG CCCCCCCGCT GCCCCATTCG AATTCCCCTT GTTCGCCCTG TTGCATGGAT
CCACTGTTAC GGCACGGCTT TTGCCTTGAT ATGTCCGGGG AAATCTATCC CGTCATCCGG
CTCCCCTGTT CCGGGGCCGC AAAAGGTGTC CATGTCATGA TTCGTTTCAT CGTCAAGCTG
CTGCTCTGTG CACTGGTCCT GCTGCCGCTG CCCGCGTTTG CCACGTCCGG CGCCGATACC
GGCCCGGACA ACCGTCTGCT GCGTATGGGG GTGCGCGCCC ACGGGGGATT TACCCGGCTT
TCCATGGCGT TCGAGCGCGA CATTGCCCCT GTCCTGCACC AGCTCTCGGG CAACAGGGTT
CGGCTGGTTT TCAGCAACAC GGTCGGCGGC CGCTGGAAGA AGCTGCGGAG CTACCGCGAC
GCGCATGTGG AGGGGGTAGT CGTGGCGCCG CGCGGTAATG ACCTTATGGT AACGGTAACG
ATCAAGGGGG ACCCTCGGGG CGTACGCGTC TCAACTTCGC CCGGCGCTGG CGTTGTTTCT
CTCGATGTGG GAGCGTCGCT CGCCCCCCGC CGCTCGCCTC CTCTTGCCCA GGGGCGTGAG
GGGATCAAGG TCGGGGTCGA GCAGCTCATC ACCACGTTCG ATCCGCCGTT TAAGTCTGAG
ATCCCCTTTA CCCCCACTGA CCGGCGGGTG CTCGAAGCAA TGGTCCCTCC CGCCGAGGCC
GCTCTGATCA TGGACGGCGA GGCTGCCCTC TATGAAGGCA ACGGCAGCGA GGCCGCCGAG
ATCTTCGCCG GGATAGGCAC CAACTCTCCC GGCCGCCCCC TGGCCCTTTA CCGGCTGGGG
GAGGCCAACT ACCTTCTCCA GAAGTACGGG GATGCTCTTC GCTTTTTCCG CGAGGCGGAG
CGCCAGTGGC CCGTCTTCCT CACCCGGTCG CCGTCCACGG CCTTCTGCTA TGCCGACAGC
GTGGCCCGTA GCGGGGATCT GGCGGGCGGT CGCCGGCTGC TCGGATCGCT CATCGCCGGC
TTGGCCGATA AAAAGTACGC GCCTGCGCTC CTGGTGCGCA TGGCCGATAT CCTGGCGCGA
CAGGGGAAGG ACCAAGAGGC GCTGGCCATC TACCGCAACG TTGCCGACAA TTTTACCGGC
AGCAAAGGGA GCTGGCAGGC CCGGATGAAG CTCGCCGACC GCCGGCTGCT TGCCTTGGAG
CCCGCAGCTT ACAGTTCGCT GGTGAAGGAT TACCTGGAGA TCTATGAGCG GGGTACGGAT
TTCGGCCTGC GCGAGCAGGG ATTATTCAAG GCGGCTCTGC TGCTCTCCCT GTATGGTGAT
GCCGATCAGG CCTTTGCCCG GGTGGCTGAA TACGAGAAAA AATTTCCGCG CGGGATGTAT
GTCAGCATTG CCAAGGGGAT GCGTGAGGAA CTCCTGGTGC CGGTCTACCG CCGGATCACC
CGCGCCGGTG ACAACGAAGC CCTTGTGAAG CTCGCCCTGG AGAACCGGGA CTATCTCGGC
CGCGTCCTGG CCGAGGACGA CTTCATCAAA AACCTGTCCG CCGCTTTCGC CGATCTGGGA
AGGATCAAGG AGGAGGTCGG CCTGTACGCG AATCTCGCCA TCCGCGAGCA AAACCGGGTG
TACGCCCCCG AGCTCTATCG CAGGATTCTC CACGATGCCG AGCAGCTGGG AGACCCGACC
CTCATGGAGA AGGCCGCGGG TGAATTTGTG GAGCGGTTCC CGGCCCATCC CTGGGTACAG
CGGTTCCGTG AGGAGCTTGC TGCGGTCGAG TATAACCGGG GAGACTTCCA GCGGGTGGTG
GGCCGGCTGT CGGGGATGCT GGCGTCGGGA ACACGGCCCG AGTATGCCGA GAGCCTGTAC
TATCTGGGCA AGTCTCTGGA CGCCTCCGGC AACCGGCGCG ATGCCGAGCG GGCCATGCTC
CTCTTTCTGG CCGAGCTCCG GCGCCGCGAA ATGTCTTCGC CGCTGGCCGC CGATGCAAGC
TACGTGGCTG CAACCGCTCG ACTGTCGCGG GGTGACCGTA AGGGAGCCAA GGAAATACTG
CGGGCCGCCG GTGAGGCTTC TCCCGAAGAG CGGGATCCAT TCCTCTACAA ACTGGGCGAG
ATCGCCCGCT CCGAAGGGCG TTACGAGGAG GCTGCCCACT ATCTCAGGAC AGTGGTCAAG
GAGGGAAAAG ACCCTGATTG GCGGGATATG GCATCGCGCC TCCTTGCCGA TATGGAGTTG
ACGGGAATGG TCCGCAAGTC AAAATGA
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| Protein sequence | MTLAPPLPHS NSPCSPCCMD PLLRHGFCLD MSGEIYPVIR LPCSGAAKGV HVMIRFIVKL
LLCALVLLPL PAFATSGADT GPDNRLLRMG VRAHGGFTRL SMAFERDIAP VLHQLSGNRV
RLVFSNTVGG RWKKLRSYRD AHVEGVVVAP RGNDLMVTVT IKGDPRGVRV STSPGAGVVS
LDVGASLAPR RSPPLAQGRE GIKVGVEQLI TTFDPPFKSE IPFTPTDRRV LEAMVPPAEA
ALIMDGEAAL YEGNGSEAAE IFAGIGTNSP GRPLALYRLG EANYLLQKYG DALRFFREAE
RQWPVFLTRS PSTAFCYADS VARSGDLAGG RRLLGSLIAG LADKKYAPAL LVRMADILAR
QGKDQEALAI YRNVADNFTG SKGSWQARMK LADRRLLALE PAAYSSLVKD YLEIYERGTD
FGLREQGLFK AALLLSLYGD ADQAFARVAE YEKKFPRGMY VSIAKGMREE LLVPVYRRIT
RAGDNEALVK LALENRDYLG RVLAEDDFIK NLSAAFADLG RIKEEVGLYA NLAIREQNRV
YAPELYRRIL HDAEQLGDPT LMEKAAGEFV ERFPAHPWVQ RFREELAAVE YNRGDFQRVV
GRLSGMLASG TRPEYAESLY YLGKSLDASG NRRDAERAML LFLAELRRRE MSSPLAADAS
YVAATARLSR GDRKGAKEIL RAAGEASPEE RDPFLYKLGE IARSEGRYEE AAHYLRTVVK
EGKDPDWRDM ASRLLADMEL TGMVRKSK
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