Gene GSU0309 details

Gene Information

• Locus tag: GSU0309
• Symbol: hypE
• ID: 2686917
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 342016
• End bp: 343029
• Gene Length: 1014 bp
• Protein Length: 337 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637124975
• Product: hydrogenase expression/formation protein HypE
• Protein accession: NP_951369
• Protein GI: 39995418
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0309] Hydrogenase maturation factor
• TIGRFAM ID: [TIGR02124] hydrogenase expression/formation protein HypE

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACAAGG AACTCATTCT GCTCGGTCAC GGCAGTGGCG GAAAGCTATC CCACCAACTC 
CTGGACGACC TCATCATCCC CACTCTGTCG GGGATATCCC TGGCGGGTCA GAACGACGCG 
GCCCTGGTGG ATGCCGACGG CCGCAGGCTG GCATTCACCA CCGATTCCTA CGTTGTTGAC 
CCCGTCTTTT TCCCGGGCGG CAATATCGGA ACCCTGGCGG TCAACGGGAC CGTCAATGAC 
CTGGCCATGA TGGGCGCGCG TCCCCTGTTC CTGAGTGCCG GCCTCATCAT CGAGGAGGGA 
TTCAGCAGGA ACGACCTCGG GACCATCCTT GCGTCCATGC GCCAGGCTGC CGATGCCGCC 
GGGGTAAGGA TCGTCACCGG CGACACCAAG GTCGTCCCCC GGGGCAAGGC CGACCGGATC 
TTCATCAATA CGTCGGGCAT CGGACTGGTG GAGCACGACT TCACCATCTC CGGCGCCTGT 
GCCCGCCCCG GCGACCGGAT CATCATCAAT GGCACCGTGG GGGACCACGG CATTGCTGTC 
ATGGCGAAGC GGGAGGGGCT TGAGCTCCTG ACCGACATCG TCAGCGACTG TGCCCCTCTC 
AACGGGCTGG TGGCCGACAT CATCGCCGAG GGCGGCGGGG ATGTTCATGT TCTGCGCGAC 
CCAACCCGGG GAGGGGTCGC CACCACTCTC AAGGAGATAG CCCTCCAGTC CGATGTTACG 
ATCATGATCC GCGAGGAAGC CATCCCCTTG GCCGGGCCAG TGAAGGGGGT TTGTGCCATC 
CTGGGTCTCG ATCCCCTTTA CGTGGCCAAC GAGGGCAAAC TTCTCGTTGC CGTGGCCCCG 
TCGGCCGCCG AGCGGGTTCT GGCGCGCATG AAGACGCATC CCTGCGGAGG GGCTGCCGCG 
ATCATCGGTG AAGTCACCGA TGCGGGCGGG GGAAAGCTCC GGCTGGAGAC ATCGGTCGGG 
GGCGTAAGGG CAGTGGAGAT GCTTGCGGGC GAGCAGTTGC CGCGCATTTG CTGA 

 

Protein sequence

MNKELILLGH GSGGKLSHQL LDDLIIPTLS GISLAGQNDA ALVDADGRRL AFTTDSYVVD 
PVFFPGGNIG TLAVNGTVND LAMMGARPLF LSAGLIIEEG FSRNDLGTIL ASMRQAADAA 
GVRIVTGDTK VVPRGKADRI FINTSGIGLV EHDFTISGAC ARPGDRIIIN GTVGDHGIAV 
MAKREGLELL TDIVSDCAPL NGLVADIIAE GGGDVHVLRD PTRGGVATTL KEIALQSDVT 
IMIREEAIPL AGPVKGVCAI LGLDPLYVAN EGKLLVAVAP SAAERVLARM KTHPCGGAAA 
IIGEVTDAGG GKLRLETSVG GVRAVEMLAG EQLPRIC