| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0065 |
|---|
| Symbol | |
|---|
| ID | 2688096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 81425 |
|---|
| End bp | 81964 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637124730 |
|---|
| Product | cytidine/deoxycytidylate deaminase family protein |
|---|
| Protein accession | NP_951127 |
|---|
| Protein GI | 39995176 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.289308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCTT TGAAAAAGAC CCCCATTCGC GACGATGCCT ATTGGATGGG AAAGGCGATT
CGAGAAGCCG CAAAAGCTGC AGCCCGTGAC GAAGTTCCCA TCGGGGCCGT TATCGTGCGT
GACGGTGCAG TGATCGGGAG GGGGCACAAC CTCCGCGAGG GTAGCAATGA TCCCTCTGCC
CATGCCGAAA TGATCGCCAT CCGGCAGGCC GCCCGCAGGT CGGCAAACTG GCGTCTTACG
GGCGCAACTC TGTATGTGAC GCTGGAACCG TGCCTCATGT GCATGGGGGC TATTATCCTC
GCACGACTGG AACGGGTCGT TTTCGGCTGT TATGACCCCA AGGGGGGCGC AGCAGGGTCA
CTCTACGATC TCTCCGCGGA CCCGCGCCTG AATCATCAGG TAAGGTTATC GCCCGGCGTC
TGTCAGGAAG AATGTGGCAC GATGCTGAGT GACTTTTTTC GTGATCTTCG CCGCAGGAAA
AAGGCCAAGG CTACCCCCGC GCTTTTCATC GATGAAAGGA AAGTGCCACC AGAGCCTTGA
|
|---|
| Protein sequence | MSSLKKTPIR DDAYWMGKAI REAAKAAARD EVPIGAVIVR DGAVIGRGHN LREGSNDPSA
HAEMIAIRQA ARRSANWRLT GATLYVTLEP CLMCMGAIIL ARLERVVFGC YDPKGGAAGS
LYDLSADPRL NHQVRLSPGV CQEECGTMLS DFFRDLRRRK KAKATPALFI DERKVPPEP
|
|---|
| |