Gene GM21_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3963 
Symbol 
ID8139337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4544688 
End bp4546274 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content66% 
IMG OID644871579 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003023737 
Protein GI253702548 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin
[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID[TIGR00397] MauM/NapG family ferredoxin-type protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0000000000774467 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCTTC CGCGCCCCCC CCGCATCTCG CAGCTTTTCT TTCTCCTCCT CTTCCTCATC 
CTGTTCCTGA TGACCGAGTA CCGCGGCAGC GACCGGATCG TCGCCGCGGT GAACGGCTTT
TTCCGGGCCG ACCCACTCAC AGCCGTCAGC AGCATGCTGG CGGTGAAGGG ATACCTCCCG
CTCCTCTTCC CCGGGCTCCT GGTGCTGGCC CTCTCCCTGA TCCTCGGACG CTTCTTCTGC
GGCTGGATCT GTCCGCTCGG GACCCTCCTG GACCTCGCGA CCGGCAGGAT CGAGAAGGTC
GGCCCCATCA AGGCGCTTCA GGGAAGCGCC AAGTACTGGC TCCTGCTCCC GTTACTCTTC
GCTTCCCTGT TCGGGCTCAA CCTGGCCGGG CTCTTCGACC CGATCGCCAT CCTGCTGCGC
GCCCTCACCT TCTTTTTCCA CCCGCTTTTG GGCGAGACGG CGCGCGGCGG CTGGAGATCG
CTCTACGGCC TGATCGCGGA CCGCAGGGAC TTCCTCGACC CCGGCTACCA CGTGCTTCGC
GACTACCTCC TCCCTTTCAG GGAGACGCTC TACCCCCTGG CCTTTTTGTC CGCGCTCCTC
TTCTTCCTGA TCCTCTTCCT GGAGCGCTAC GAAAAACGCT GCTGGTGCCG CCGGCTCTGC
CCCTTGGGGA CCCTGTTAGG CCTCGTCTCC CGCTTCGGCC CCTTGCGGCG GCTCCCCGCG
AAGCTCTGCC CCGACTGCCG CACCTGCCGC GAGCATTGCC CGACCTCCTT CGACCGCGAA
CTGCTGCAGA TGGACGAGTG CATCCTCTGC CTTCAATGCG CGCTCAACTG CCCGTCGCAG
CGGGTCCGCT TCGATTTCAA GGGGATGCGG CCTCAGGCGG GACCGGTGAT GGAGCGGCGG
GTCCTCCTTG GGGGACTTTT GGGAGGATTC GTCCTTGCCA GGACCTTCCG CTTCCGCGAG
CCAGAAGCAC AGGCGAGGAT GCTGCGACCT CCCGGGGTGC GGGAGGAGGG GGAGTTCCTG
GAGAAATGCG TGCGCTGCGG GGAGTGCATG AAGGTCTGCC TGAGAAGCGC GCTCTACCCC
GCTTTGCTGC AGGCTGGGCC GGAGGCGCTC TACACCCCGG TCCTCGTGCC GCGGCTGGGA
TACTGCGAGT ACAACTGCAC CCTCTGCGGC CAGGTCTGCC CCACCGGAGC CATCCCCGAT
CTTGCCGTCG AGGCGAAAAA GCGGGAGGTG ATCGGCAAGG CGGTCTTCGA CAAGAACCAC
TGCCTCCCCT TCGCCAAAAG GGTGGACTGC ATCGTCTGCG AGGAGCACTG CCCGATCCCG
CAAAAGGCGA TCCGCTCCGA ACTGGTGGAG CTGACCGGTT TCCAGGGCGA GAAGCTGCAG
GTGAAGCAGC CTTACGTGGT GAGCGAGCTC TGCAACGGCT GCGGCATTTG CGAGAACGTC
TGCCCTTTGG AAGGAAAGTC CGCCATCGAG GTCTTCGCGG TGAAGGACCG CGCCCCTCTT
CCCCCTCCCG CCGACGCGCC GTCCGCACCC GCCTCCCAAC CCTCCGGCGG CGCTCCTCCC
GATCCCTATG CCGAAAACAG CGGCTGA
 
Protein sequence
MKLPRPPRIS QLFFLLLFLI LFLMTEYRGS DRIVAAVNGF FRADPLTAVS SMLAVKGYLP 
LLFPGLLVLA LSLILGRFFC GWICPLGTLL DLATGRIEKV GPIKALQGSA KYWLLLPLLF
ASLFGLNLAG LFDPIAILLR ALTFFFHPLL GETARGGWRS LYGLIADRRD FLDPGYHVLR
DYLLPFRETL YPLAFLSALL FFLILFLERY EKRCWCRRLC PLGTLLGLVS RFGPLRRLPA
KLCPDCRTCR EHCPTSFDRE LLQMDECILC LQCALNCPSQ RVRFDFKGMR PQAGPVMERR
VLLGGLLGGF VLARTFRFRE PEAQARMLRP PGVREEGEFL EKCVRCGECM KVCLRSALYP
ALLQAGPEAL YTPVLVPRLG YCEYNCTLCG QVCPTGAIPD LAVEAKKREV IGKAVFDKNH
CLPFAKRVDC IVCEEHCPIP QKAIRSELVE LTGFQGEKLQ VKQPYVVSEL CNGCGICENV
CPLEGKSAIE VFAVKDRAPL PPPADAPSAP ASQPSGGAPP DPYAENSG