Gene GM21_3926 details

Gene Information

• Locus tag: GM21_3926
• ID: 8139300
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 4510412
• End bp: 4512496
• Gene Length: 2085 bp
• Protein Length: 694 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644871543
• Product: Tetratricopeptide TPR_4
• Protein accession: YP_003023701
• Protein GI: 253702512

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 62
• Fosmid unclonability p-value: 0.0916918
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCTACA CGTTGCGCAC ACCCCGCCCA GGGCTCGCCC TGCTGCTCCT GCTCGTTGTC 
GCCTGCGCGC TCCCCGGCCG CGCCCAGGCG CAGCAGGATA ACCGCCTGCG CCGTATCGCC 
GTCCGTCCCC ACCAGGAATT CACCAGGATC GACCTCTTCT TCCAATCCCC CCCGGATTAC 
TCGCTCAGGC TCTCCCCGGG ACGGGTCCGC TTAGAGATCA GGGGGGCCGA CGCCCCGAGC 
TTCAGGAAGC TGCGCGGCTA CGCGGACGCC AGGCTCTCCG GCATCTTCAC CGAGCTGCGG 
GCAGGCGTCT TGAGCGTCTC CATTCCGGTG CGCGAGTCGG AGCCGGGGGT GCAGGCGGTT 
TCCTACGGTA ACCCTTCGGT CCTCTCGCTC GACATCGGGC CGGGGGTGAA GCGTGCAGGA 
AGGGTCGACA TCGCGCCGGG GCGCGAGCCG ATCCTCGCCG GGACCGAACA GTTCGTGCGC 
GCCTTCGAAT CGGAGCCGGG CGGGCTCCCC TTCGCCCCCA CCGACGCGAA GCTTTTGAAG 
GAGCTCTTCG CCCCCGAGGA GCTGGCGCTC TTCCAGCAGG GGGAGAGCCT CCTATACGAG 
GAGCAGGCGG AGGTCGCGGC AGGGGTCTTC GCCACCTTCC TGGGTAAGCC CCGGGGGGCG 
CGGGCGCTCG CCTTTTACCG GCTCGCAGAG GCGCTCTTGG GGCTTGGGCG CGTCAAGGAG 
GCGCTGGACG CCTTCAAGCA GGGGGAGGCG GCCTGGCCGC AGTACCTGGA GCAGGCAGCC 
GACATCCAGC AATCCTACGC CGACGCCCTG GCCCGAAGCG GCGACTTCGC CGCCGGGCGC 
CGCAAGCTCC TGCAGCTCAT GGACCGCTAC GTCGGCACCC CCTACCAGGC CGAGCTGATG 
AGCCGCCTGG CGGACCTGTC GCAGCGGGAG GGAAGAAAGC TTGCGGCGGC GGCTTTGTAC 
CGGAGCGTCG TCGTGCACGC GCCGGGAAGC GCCGCCGCGG CAAGGGCGCG CCTGAAGCTT 
GCCGACCGGG AACTCTTCAC CCTTTCCCGT GACCGCTACC GGGAACTTTT GGCCAAGTAC 
CAGGGGGTCT ACCAGGCGCC CGGCGATTTC GCCACGAGGG ACGAGGCGCT CTTCAAGACG 
GCGCTGCTAC TGGCCCTTTA CGCCCCCCCC CGGGAGGCGC TGGAGGCCGT CATCAGCTAC 
GACCGGCGCT ACCCGCGCGG CATCTTCAGC ACCATCGTCA AACAGATGCG CGAGGAGCTC 
TTGCTCCCCA GCTACCGCGA GCTCGCCGCT GCGGGAAAGG ACGAGGCCCT GGTGCAACTC 
GCGCGGGAGA ACCGGGAGCA TCTCGCCAGG TGCTTCAGCG ACCCCGCTTT CCCCGAGAGG 
CTCTCCCAGG CCTTCGAACG GACCGGGAAG CTGACCCAGG AGATGGAGCT TTTCGGTTAC 
CTGGACGAGA AGAACTGGGC CGCGGCGGGC GCCCCCTTCA TGCTCTCCCG CGTGGTCGAC 
GACGCGGTCA CCTTGGGCAA CCTGGCGCAG GCGGAGGAGG CGGGGCGCAG GTTCCTGCAG 
CGTTTCCCGG CCGACGCGCG CGCCGCGAGG GTCAAGGAGC AACTGGGGCG GATCGCCTTC 
GAAAAGGGGG ACCTGCCGGC GGCGGGCGCG GAGCTTCGCT TCCTCGCGGC CAAGGGGGCC 
CGGGCGCAGT TTCCCGACAG CGACTATTAT CTCGGCAAGG CGCAGCTGGC CGCCGGCGAC 
CACAGGGGGG CGGTGCGGAG CCTCGCCCGG TTCACCCAGA ACGTGAGGGA GGACTCGGCG 
CTTCTTCCCG ACGGCTACTT CACCCTGGCC GGGGCGCTTG CCGCCTTCAA GGATTACGAC 
CGGGCGCTTG CCGCCTGCGA GGTCGGGGGG AGGGTCGTCG CCGGGGAGGG GGTCGCCCAG 
TTCAAGTACA AGGCGGGCGA ACTCTACCTG CAGCAGGGGG AGGTGGCCAA GGCTCAAGCG 
AGCTGGGAGA AGGCGGCGGC TTTAGGGGGG ACCTGGGGGA AACTCGCCGG CGAGGCGCTC 
GCGGACCTCA AATGGCGCAT GAAGATCTCC AAGGAGCTTC CCTGA 

 

Protein sequence

MTYTLRTPRP GLALLLLLVV ACALPGRAQA QQDNRLRRIA VRPHQEFTRI DLFFQSPPDY 
SLRLSPGRVR LEIRGADAPS FRKLRGYADA RLSGIFTELR AGVLSVSIPV RESEPGVQAV 
SYGNPSVLSL DIGPGVKRAG RVDIAPGREP ILAGTEQFVR AFESEPGGLP FAPTDAKLLK 
ELFAPEELAL FQQGESLLYE EQAEVAAGVF ATFLGKPRGA RALAFYRLAE ALLGLGRVKE 
ALDAFKQGEA AWPQYLEQAA DIQQSYADAL ARSGDFAAGR RKLLQLMDRY VGTPYQAELM 
SRLADLSQRE GRKLAAAALY RSVVVHAPGS AAAARARLKL ADRELFTLSR DRYRELLAKY 
QGVYQAPGDF ATRDEALFKT ALLLALYAPP REALEAVISY DRRYPRGIFS TIVKQMREEL 
LLPSYRELAA AGKDEALVQL ARENREHLAR CFSDPAFPER LSQAFERTGK LTQEMELFGY 
LDEKNWAAAG APFMLSRVVD DAVTLGNLAQ AEEAGRRFLQ RFPADARAAR VKEQLGRIAF 
EKGDLPAAGA ELRFLAAKGA RAQFPDSDYY LGKAQLAAGD HRGAVRSLAR FTQNVREDSA 
LLPDGYFTLA GALAAFKDYD RALAACEVGG RVVAGEGVAQ FKYKAGELYL QQGEVAKAQA 
SWEKAAALGG TWGKLAGEAL ADLKWRMKIS KELP