Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3872 |
Symbol | |
ID | 8139246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 4455577 |
End bp | 4459143 |
Gene Length | 3567 bp |
Protein Length | 1188 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644871489 |
Product | hypothetical protein |
Protein accession | YP_003023647 |
Protein GI | 253702458 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC CCGAGAAGAA AGAGAAGGAT CCAACAAAAA TCGCCGTCAT CGCCTCTCTC GTTGCTGCAT CGGCATTGGG GCTGGTGCTG CTTTGCCTCG TCGCCTTCCG GATCTACCTC GCCACTTCCT TACCCGCCTC ACAGCTCTCC CGCCTTGTCA CCGACCGGCT GCAGCAGGAT TTCACCGTCA AGGAGATCGA CCTTTCCGGC AAGGCCCTCA TCCTCAAAGG GGTGCGCCTG AAGAACCCGG CGGGGTTTGC TTCCGGCGAA CTCTTCGCGG CCGACCGGGT GGTTCTCGCC CCCCGGTGGA ATCAACTTCT GCGGGGACGG CAGCGCTTCG AGCTGATAGA CGTCGGGGGG GGGAAGCTCG CCTTGGAAAA AAATGGCAGC GGCACCTGGA ACTTCGAGAA CCTCCAGCGC CGGCTCGCGG CGAGAAAGCC TGCCGCGGAA AGACCAGCCC CGGAAACGGT GATCGGGAAG CTCCTGGTGA AAAACGGCAG CATCACCATC CAGGGGAAAG GGGTGCACGG AATCAACCTG CAGGTCTTCA ACCTGGCCAG CGGCGGGTCC CGTCGCGCCC AAGTGGAACT TGCCTTCGAG GACGCCGTCG GCAACCGCTA CCTTTTGAAG GGGACCGCCC GCCCCGGAGC GGACGCCGCT GTCGACCTCT CCCTCACGGC GCCTACCATG TCCCTGAAGA ACCTAGCGCA GCTTTTCAAG CTGAAGGATC CCGAACCCTT TCAGGATGCC CAAGGGGCGC TGCGGGCGAG CGCGGTGCTG GCGAAGGGGG AGCTGAAAAC CACCGGGAGC TTCTCCTTTC GCAGGGTCCT GATCCCCGCC GCCCGGGGCG ACTACCCCAT CGCAGGTCTT TTGCAATTCA ACGGCGTCTA CGACCTCTCC GAGGACACGG CCCACTTGGA CGAAGCGACG CTCACCATAG ACAAGATGGC GCGGCTGCAG GCAGGCGGAA CCGTCAGCGG CGTGAAGAAG GAAAGAGTGT TCGATCTCCT TCTTTCCCTG GACGCGGTGG ACCTCGCGCT GATAAACGTG CTGCTGCCGG AAGAATCGCG CCACGACCTG GATTTCGGCG GCAGGCTCCG CTGCGAGTCG TTGCGCCTGG AAGGAAACGG CAGCGCGGGT ATCGAGAGCG TGGTGGGGAA CCTGCAACTG CAGGAAGGCT CGCTGGCCCG GGAACGGGAA TTGATCGCGG CGGGGGTGGC GGGGAATCTC GCCCTCTCCC GGCACGGTGC GACCGTGTCC GCGCGCGGCA AGTTCTCCCT CCCCCATCCG GAGCCGAAGG CGCTGGTCCA GGCGCTGGAA CTCCCGGTGG AACTCACCCT TTCCGCTGGC CTGAAGCCGC TTCGCGCCAA AAGCGATGCG TTTTCCGCCA GGATCCTGGG GATTGCCGTG TCAGGGCGTG CCGCTTACGA CGCTGGGAAC TCCGAGCCGG TGCGAGCCGA TCTCGCCTTT GCGACCAGGG AACCGGAGCG GCTCAACCCG TGGCTCTCCC GTTACGGCAT CGCGGCCTTC TCCGGAACCG GTTCCGGCAG CGTCCTGTTG GCGGGTAAGG GGGCCCAGGA GATGAACGCC TCGGCCCGGC TCACGGTCGC GAACCTCAAG GGGAAGCAGG GGAAGGACAA TATCGGCGTG AAGGCGGGGA CGGCGACGGC CGCGGCGACG AAGCGGGGAG AGAAACTAGA GGTTCGCGGG GACGCCCGTC TCGCCGCCAT CTCCTTCCAG GGGAAGAGCG GCGGCGCGCG TTTCGCCTAC CGGGTGGCGG ACCGCTACCT CTACTTGAAC GGGGTGCAAG CCTCGTGGGG GGAAACCCGC TTCTCCGCGT CGAGCCTGAG CGGAGAACTC CCGGCCGCGA CGGTCACCGG GCAGCTTACC CGCCGTCCGC TGCGCTTCGA CCTTGAGGGG GGGGCGCTCG GGCAGGGGGA TTTCCAGCTC TCCGGCATCG CGGGGAGGGT AAGGGGGAGC CTCGCCGGCG AAGGGAAGGA GAAGTGGCTG GAAGGAAGCG CCGATCTCGC CTCCCGCGCC CTCTCCTGGC GCCAGGGGGC GATGGCGGCG CCTGCCCTGC ATGCCGCTTT CACGAGGCAG GGGGGGCGGG CCGAACTGAA CGGACAACTG CTGGGGGGTA AGGTGGCGGC AAAGGCGGCC TTTCGCCCCT TCGCTCCGGG AGCGCCGTCC AGCTTCAGCG TCAGCATGAC CGGCGCCGCC GCGAAGGAGA TTGCGCGCCT TGCCGCCGGC GAAGCCGGCA TCCGCCCCAG CGCCGGTACC GTTGACTTTA GACTGGAAGG GACCCACGCC GGGAAAAGCG GTCTCTCCTG CCGCTTCGAC GCCAGGGGGC GGGAGATCTC CCTCGCCAAC GCCACGGGGA AGAGCCTCGT GTCGGGTGCA GCCGCTTCGG TCAGGGGGCG CCTGTCCGGA GGCACCCTGA CCATCGAAGA GGCCAATGCT TCCCCGGGGC GGGGCGTTGT CCTTACCGCG CGGGGGGAGA TAGCGGATGC GCAGTCGGAG AAGCGGCGCG GGACCTTGCT GCTAACCCTG CCGGAGACCT CGCTGAACGA CCTGGTGGAG TCGCTCATCA ACCTCGCCCC CCCGCTGATC CAGGAGGCGA CGCTGAAGGG GAGCGTGGCG GCGGAGGGGA GGATGGAGCT GCGCGAAGGA CGCAAGGTTC TCAACGGCGG CGTGACGGTG AGGGGGGGAA GGGTGGAGGC GTCAGCCCAG AAATTCCTGG TGGCGGATCT GAACGGAAGG ATTCCTATAT CTCTCGACCT CGGAGGCAAG GGGAGCGCCG CCCCGCGCGC CGCCGGGGAG TTCAGCCGGG AGAATTATCC CCGCGTCCTG GCGCAACTGC GCGCAACCCA GCAGGGGGGG GACCTGGTCA CCGTCGAGAG GATCGGCTTC GGCTCCGTCC AGACCGGGAA GCTCAGCGCG CAGCTTCGTT CCCAAAACGG GCTCACGGAG ATCACCTCCC TGCGCACCAC CCTTTACGAC GGGACCGTGT TGGGGAGAGG CCATCTTCTA TTTTCCGGCC GGGCGACCTA CCGGGGCGAC CTCCTGGTGA ACGGTCTCAG CATGAAGGCC CTGTGCAAGA GCCTCCCCAA CCTTGAGGGG TACATCTCCG GACGCGTGGA CGGCGTTGTC AGCGTGCACG GCATCGGCGG AGACCAAAAG CGCTTGACCG GATTCGTAGA TCTCTGGGCG CGGGAAGGGG GGGGCGAAAA GATGGTGGTG AGCAAGCAGT TCCTGCAGCG CCTGGCCAAG CAGAAGCTCT CAGGCTTCTT CCTGAGCCGC GACCGCCCCT ACGACAGGGC GGAGATCAAG GCTACGCTGG AGCGGGGAGA GCTCACCTTC AACGAGCTGC AGATCCTGAA CACCAACGCC CTCGGGGTCA AGGACCTGAA CGTCAACATC GCCCCGACGC AGAACCGGAT CGCCCTGGAC CATCTGCTTG AGTCGATAAA GGAGGCGGCG GTGCGCGGCG TGCCGGCCTC TGGCGGAGAG GCCCCGGCGC AGAAGCCGCA GCAGGAACCG GCGCCCGAGT TCAAGTGGGA GGAGTGA
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Protein sequence | MSEPEKKEKD PTKIAVIASL VAASALGLVL LCLVAFRIYL ATSLPASQLS RLVTDRLQQD FTVKEIDLSG KALILKGVRL KNPAGFASGE LFAADRVVLA PRWNQLLRGR QRFELIDVGG GKLALEKNGS GTWNFENLQR RLAARKPAAE RPAPETVIGK LLVKNGSITI QGKGVHGINL QVFNLASGGS RRAQVELAFE DAVGNRYLLK GTARPGADAA VDLSLTAPTM SLKNLAQLFK LKDPEPFQDA QGALRASAVL AKGELKTTGS FSFRRVLIPA ARGDYPIAGL LQFNGVYDLS EDTAHLDEAT LTIDKMARLQ AGGTVSGVKK ERVFDLLLSL DAVDLALINV LLPEESRHDL DFGGRLRCES LRLEGNGSAG IESVVGNLQL QEGSLARERE LIAAGVAGNL ALSRHGATVS ARGKFSLPHP EPKALVQALE LPVELTLSAG LKPLRAKSDA FSARILGIAV SGRAAYDAGN SEPVRADLAF ATREPERLNP WLSRYGIAAF SGTGSGSVLL AGKGAQEMNA SARLTVANLK GKQGKDNIGV KAGTATAAAT KRGEKLEVRG DARLAAISFQ GKSGGARFAY RVADRYLYLN GVQASWGETR FSASSLSGEL PAATVTGQLT RRPLRFDLEG GALGQGDFQL SGIAGRVRGS LAGEGKEKWL EGSADLASRA LSWRQGAMAA PALHAAFTRQ GGRAELNGQL LGGKVAAKAA FRPFAPGAPS SFSVSMTGAA AKEIARLAAG EAGIRPSAGT VDFRLEGTHA GKSGLSCRFD ARGREISLAN ATGKSLVSGA AASVRGRLSG GTLTIEEANA SPGRGVVLTA RGEIADAQSE KRRGTLLLTL PETSLNDLVE SLINLAPPLI QEATLKGSVA AEGRMELREG RKVLNGGVTV RGGRVEASAQ KFLVADLNGR IPISLDLGGK GSAAPRAAGE FSRENYPRVL AQLRATQQGG DLVTVERIGF GSVQTGKLSA QLRSQNGLTE ITSLRTTLYD GTVLGRGHLL FSGRATYRGD LLVNGLSMKA LCKSLPNLEG YISGRVDGVV SVHGIGGDQK RLTGFVDLWA REGGGEKMVV SKQFLQRLAK QKLSGFFLSR DRPYDRAEIK ATLERGELTF NELQILNTNA LGVKDLNVNI APTQNRIALD HLLESIKEAA VRGVPASGGE APAQKPQQEP APEFKWEE
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